RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 LAIR1Q6GTX8 287 aa20.26■□□□□ 0.83
ABCA3-204ENST00000566200 PKN3Q6P5Z2 889 aa20.26■□□□□ 0.83
ABCA3-204ENST00000566200 DCP1BQ8IZD4 617 aaKnown RBP20.26■□□□□ 0.83
ABCA3-204ENST00000566200 USP13Q92995 863 aaPredicted RBP20.26■□□□□ 0.83
ABCA3-204ENST00000566200 GCNAQ96QF7 691 aa20.26■□□□□ 0.83
ABCA3-204ENST00000566200 USP28Q96RU2 1077 aa20.26■□□□□ 0.83
ABCA3-204ENST00000566200 FAM83CQ9BQN1 747 aa20.26■□□□□ 0.83
ABCA3-204ENST00000566200 GKN1Q9NS71 199 aa20.26■□□□□ 0.83
ABCA3-204ENST00000566200 RBAKQ9NYW8 714 aaPredicted RBP20.26■□□□□ 0.83
ABCA3-204ENST00000566200 USP18Q9UMW8 372 aa20.26■□□□□ 0.83
ABCA3-204ENST00000566200 EXOC7Q9UPT5 735 aa20.26■□□□□ 0.83
ABCA3-204ENST00000566200 HCRTO43612 131 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 TADA3O75528 432 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
ABCA3-204ENST00000566200 PDCP20941 246 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 GARTP22102 1010 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 ACAT1P24752 427 aaKnown RBP20.25■□□□□ 0.83
ABCA3-204ENST00000566200 TAF12Q16514 161 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 ITPRIPL2Q3MIP1 535 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 HEATR6Q6AI08 1181 aaKnown RBP20.25■□□□□ 0.83
ABCA3-204ENST00000566200 TRIM68Q6AZZ1 485 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 PRR23BQ6ZRT6 265 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 OSTM1Q86WC4 334 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 MAB21L3Q8N8X9 362 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 LEO1Q8WVC0 666 aaPredicted RBP20.25■□□□□ 0.83
ABCA3-204ENST00000566200 PANK2Q9BZ23 570 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 DDX43Q9NXZ2 648 aaKnown RBP20.25■□□□□ 0.83
ABCA3-204ENST00000566200 SIX4Q9UIU6 781 aa20.25■□□□□ 0.83
ABCA3-204ENST00000566200 MORC2Q9Y6X9 1032 aaPredicted RBP20.25■□□□□ 0.83
ABCA3-204ENST00000566200 PRPF40AO75400 957 aaKnown RBP20.24■□□□□ 0.83
ABCA3-204ENST00000566200 IDEP14735 1019 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 TSPY1Q01534 308 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 SIM2Q14190 667 aaPredicted RBP20.24■□□□□ 0.83
ABCA3-204ENST00000566200 DDR2Q16832 855 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 INTS6LQ5JSJ4 861 aaKnown RBP20.24■□□□□ 0.83
ABCA3-204ENST00000566200 TXNDC8Q6A555 127 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 LONP2Q86WA8 852 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 LRRC52Q8N7C0 313 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 GLIS3Q8NEA6 775 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 ACBD6Q9BR61 282 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 PDE11AQ9HCR9 933 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 THG1LQ9NWX6 298 aaKnown RBP20.24■□□□□ 0.83
ABCA3-204ENST00000566200 GDAP2Q9NXN4 497 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 RAB23Q9ULC3 237 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 PCDHB13Q9Y5F0 798 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.24■□□□□ 0.83
ABCA3-204ENST00000566200 PTPRJQ12913 1337 aa20.24■□□□□ 0.83
ABCA3-204ENST00000566200 GREB1Q4ZG55 1949 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 ANAPC1Q9H1A4 1944 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 PRR5-ARHGAP8B1AHC4 643 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 EXTL3O43909 919 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 PRPF6O94906 941 aaKnown RBP20.23■□□□□ 0.83
ABCA3-204ENST00000566200 LDHAP00338 332 aaKnown RBP20.23■□□□□ 0.83
ABCA3-204ENST00000566200 RETP07949 1114 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 CYP2F1P24903 491 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 HOXA6P31267 233 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 TXLNAP40222 546 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 STAT6P42226 847 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 ARHGAP8P85298 464 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 BFSP1Q12934 665 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 RUNX3Q13761 415 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 SLC39A14Q15043 492 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 NFE2Q16621 373 aaPredicted RBP20.23■□□□□ 0.83
ABCA3-204ENST00000566200 TMEM196Q5HYL7 178 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 FSTL4Q6MZW2 842 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 CCDC73Q6ZRK6 1079 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 MON1AQ86VX9 555 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 SYNPOQ8N3V7 929 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 CSGALNACT2Q8N6G5 542 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 MTMR12Q9C0I1 747 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 EBF3Q9H4W6 596 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 PCIF1Q9H4Z3 704 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 ABCB6Q9NP58 842 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 TDP1Q9NUW8 608 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 PANK4Q9NVE7 773 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 ZMYM5Q9UJ78 669 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 GTF3C4Q9UKN8 822 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 ITGA11Q9UKX5 1188 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 CDV3Q9UKY7 258 aaKnown RBP20.23■□□□□ 0.83
ABCA3-204ENST00000566200 MAGED2Q9UNF1 606 aaPredicted RBP20.23■□□□□ 0.83
ABCA3-204ENST00000566200 MTMR6Q9Y217 621 aa20.23■□□□□ 0.83
ABCA3-204ENST00000566200 TULP1O00294 542 aaPredicted RBP20.22■□□□□ 0.83
ABCA3-204ENST00000566200 GABRDO14764 452 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 HUS1O60921 280 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 NOL4O94818 638 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 CSH1P0DML2 217 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 CSH2P0DML3 217 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 ARSAP15289 507 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 SDHBP21912 280 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 DDX6P26196 483 aaKnown RBP eCLIP20.22■□□□□ 0.83
ABCA3-204ENST00000566200 AVPR1AP37288 418 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 ALCAMQ13740 583 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 SOWAHAQ2M3V2 549 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 LMBRD2Q68DH5 695 aaPredicted RBP20.22■□□□□ 0.83
ABCA3-204ENST00000566200 SYCP3Q8IZU3 236 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 TMEM86AQ8N2M4 240 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 CACTINQ8WUQ7 758 aaKnown RBP20.22■□□□□ 0.83
ABCA3-204ENST00000566200 HPS3Q969F9 1004 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 FBRSL1Q9HCM7 1045 aaKnown RBP20.22■□□□□ 0.83
ABCA3-204ENST00000566200 SNX9Q9Y5X1 595 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms