RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 VRTNQ9H8Y1 702 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 SIX4Q9UIU6 781 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 A0A1W2PRU2 124 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 KLRC4O43908 158 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 VNN2O95498 520 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 PFKLP17858 780 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 WARSP23381 471 aaKnown RBP17.93■□□□□ 0.46
USB1-211ENST00000565662 GABRR2P28476 465 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 CCR2P41597 374 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 TEAD2Q15562 447 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 LIMS2Q7Z4I7 341 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 SHKBP1Q8TBC3 707 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 EXOC4Q96A65 974 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 TCEAL4Q96EI5 215 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 LRRC3Q9BY71 257 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 TASP1Q9H6P5 420 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 TRAF3IP3Q9Y228 551 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 SLC27A5Q9Y2P5 690 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 ZDHHC9Q9Y397 364 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 ATP8B3O60423 1300 aa17.93■□□□□ 0.46
USB1-211ENST00000565662 PROB1E7EW31 1015 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 ZNF263O14978 683 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 CLIC2O15247 247 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 CHADO15335 359 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 PHACTR2O75167 634 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 FCARP24071 287 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 NDUFA8P51970 172 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 WNT7BP56706 349 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 CLDN10P78369 228 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 SNW1Q13573 536 aaKnown RBP17.92■□□□□ 0.46
USB1-211ENST00000565662 PPP2R5DQ14738 602 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 ARHGAP29Q52LW3 1261 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 TANGO2Q6ICL3 276 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 KRBA2Q6ZNG9 492 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 GUF1Q8N442 669 aaKnown RBP17.92■□□□□ 0.46
USB1-211ENST00000565662 KIAA0895Q8NCT3 520 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 ZSWIM2Q8NEG5 633 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 TMC2Q8TDI7 906 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 CSGALNACT1Q8TDX6 532 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 MRPS31Q92665 395 aaKnown RBP17.92■□□□□ 0.46
USB1-211ENST00000565662 TAF4BQ92750 862 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 TMEM209Q96SK2 561 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 MMS19Q96T76 1030 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 IMPG2Q9BZV3 1241 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 CRISPLD1Q9H336 500 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 SNX25Q9H3E2 840 aa17.92■□□□□ 0.46
USB1-211ENST00000565662 C8orf33Q9H7E9 229 aaPredicted RBP17.92■□□□□ 0.46
USB1-211ENST00000565662 THG1LQ9NWX6 298 aaKnown RBP17.92■□□□□ 0.46
USB1-211ENST00000565662 IKBKBO14920 756 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 TRIM66O15016 1216 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 MOSPD3O75425 235 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 ATF6P18850 670 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 NBL1P41271 181 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 RPS9P46781 194 aaKnown RBP17.91■□□□□ 0.46
USB1-211ENST00000565662 PPP3CCP48454 512 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 MRE11P49959 708 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 FCHO2Q0JRZ9 810 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 STK4Q13043 487 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 SOWAHAQ2M3V2 549 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 INTS8Q75QN2 995 aaKnown RBP17.91■□□□□ 0.46
USB1-211ENST00000565662 HS6ST3Q8IZP7 471 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 RDH13Q8NBN7 331 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 OR5B17Q8NGF7 314 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 CCDC127Q96BQ5 260 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 SYT15Q9BQS2 421 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 DMAC2Q9NW81 257 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 MAGEC2Q9UBF1 373 aaPredicted RBP17.91■□□□□ 0.46
USB1-211ENST00000565662 CACNA1HO95180 2353 aa17.91■□□□□ 0.46
USB1-211ENST00000565662 ZNF202O95125 648 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 NR3C1P04150 777 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 ANXA13P27216 316 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 AVPR1AP37288 418 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 PPP1R2P41236 205 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 AMPD2Q01433 879 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 DPYDQ12882 1025 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 BIRC3Q13489 604 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 GPR158Q5T848 1215 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 FAM171BQ6P995 826 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 VITQ6UXI7 678 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 TPRG1Q6ZUI0 275 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 CELF5Q8N6W0 485 aaKnown RBP17.9■□□□□ 0.46
USB1-211ENST00000565662 PARD3BQ8TEW8 1205 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 TNIP3Q96KP6 325 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 SPATA17Q96L03 361 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 MYRFLQ96LU7 910 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 RPP25Q9BUL9 199 aaKnown RBP17.9■□□□□ 0.46
USB1-211ENST00000565662 KCTD10Q9H3F6 313 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 ZNF334Q9HCZ1 680 aaPredicted RBP17.9■□□□□ 0.46
USB1-211ENST00000565662 LTB4R2Q9NPC1 389 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 DENND4CQ5VZ89 1909 aa17.9■□□□□ 0.46
USB1-211ENST00000565662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.89■□□□□ 0.45
USB1-211ENST00000565662 HEPACAM2A8MVW5 462 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 NOL4O94818 638 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 SMC2O95347 1197 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 KRT13P13646 458 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 CASP1P29466 404 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 GDI1P31150 447 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 ZNF268Q14587 947 aaPredicted RBP17.89■□□□□ 0.45
USB1-211ENST00000565662 ANGPT1Q15389 498 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 ZNF699Q32M78 642 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms