RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 MYL7Q01449 175 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 CCDC142Q17RM4 750 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 DUOXA2Q1HG44 320 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 ARHGAP15Q53QZ3 475 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 DPH6Q7L8W6 267 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 GPIHBP1Q8IV16 184 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 C12orf56Q8IXR9 622 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 GRAMD1CQ8IYS0 662 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 ADGRF2Q8IZF7 708 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 HPDLQ96IR7 371 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 GZF1Q9H116 711 aaPredicted RBP16.82■□□□□ 0.28
CDH3-204ENST00000565453 SEMA4AQ9H3S1 761 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 ABCB6Q9NP58 842 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 SPATA6Q9NWH7 488 aaPredicted RBP16.82■□□□□ 0.28
CDH3-204ENST00000565453 SERTAD1Q9UHV2 236 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 MRPS17Q9Y2R5 130 aaKnown RBP16.82■□□□□ 0.28
CDH3-204ENST00000565453 ZDHHC9Q9Y397 364 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 PIAS3Q9Y6X2 628 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 FANCMQ8IYD8 2048 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 DMDP11532 3685 aa16.82■□□□□ 0.28
CDH3-204ENST00000565453 CACNA1IQ9P0X4 2223 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 NCAM2O15394 837 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
CDH3-204ENST00000565453 PRAMEF12O95522 483 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 TNNC2P02585 160 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 SLFN14P0C7P3 912 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 LHX1P48742 406 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 CYP24A1Q07973 514 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 MYO1EQ12965 1108 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 PSMD6Q15008 389 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 SNRNP35Q16560 246 aaKnown RBP16.81■□□□□ 0.28
CDH3-204ENST00000565453 ZNF528Q3MIS6 628 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 SDHAF4Q5VUM1 108 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 TRAPPC11Q7Z392 1133 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 XXYLT1Q8NBI6 393 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 RDH13Q8NBN7 331 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 STKLD1Q8NE28 680 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 KBTBD7Q8WVZ9 684 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 CGRRF1Q99675 332 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 SLC46A2Q9BY10 475 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 SLC39A2Q9NP94 309 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 GTF3C4Q9UKN8 822 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 FBXO4Q9UKT5 387 aa16.81■□□□□ 0.28
CDH3-204ENST00000565453 KIF26AQ9ULI4 1882 aaPredicted RBP16.8■□□□□ 0.28
CDH3-204ENST00000565453 MYBPHLA2RUH7 354 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 LAMTOR5O43504 91 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 NOL4O94818 638 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 CYP2F1P24903 491 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 CYP2J2P51589 502 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 NLRP12P59046 1061 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 CFAP221Q4G0U5 840 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 FAM171BQ6P995 826 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 YAF2Q8IY57 180 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 FAM3CQ92520 227 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 PAGE5Q96GU1 130 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 GCNAQ96QF7 691 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 CHRDQ9H2X0 955 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 CGNQ9P2M7 1197 aaKnown RBP16.8■□□□□ 0.28
CDH3-204ENST00000565453 NDRG2Q9UN36 371 aaKnown RBP16.8■□□□□ 0.28
CDH3-204ENST00000565453 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
CDH3-204ENST00000565453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.79■□□□□ 0.28
CDH3-204ENST00000565453 ATP2C2O75185 946 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 TADA3O75528 432 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 CST3P01034 146 aaPredicted RBP16.79■□□□□ 0.28
CDH3-204ENST00000565453 CSH1P0DML2 217 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 CSH2P0DML3 217 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 PFKFB1P16118 471 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 WARSP23381 471 aaKnown RBP16.79■□□□□ 0.28
CDH3-204ENST00000565453 LMO2P25791 158 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 PCSK1P29120 753 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 TAF12Q16514 161 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 DDR2Q16832 855 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 KNOP1Q1ED39 458 aaKnown RBP16.79■□□□□ 0.28
CDH3-204ENST00000565453 ARHGAP29Q52LW3 1261 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 HS2ST1Q7LGA3 356 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 ADSSL1Q8N142 457 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 KIAA0895Q8NCT3 520 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 ZNF516Q92618 1163 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 NELL1Q92832 810 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 MSANTD3Q96H12 275 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 FUBP3Q96I24 572 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDH3-204ENST00000565453 ZFYVE19Q96K21 471 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 SMG9Q9H0W8 520 aaKnown RBP16.79■□□□□ 0.28
CDH3-204ENST00000565453 PRMT8Q9NR22 394 aaPredicted RBP16.79■□□□□ 0.28
CDH3-204ENST00000565453 ZMYM5Q9UJ78 669 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 NME7Q9Y5B8 376 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 OBSL1O75147 1896 aa16.79■□□□□ 0.28
CDH3-204ENST00000565453 SOBPA7XYQ1 873 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 DPYSL4O14531 572 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 LMNAP02545 664 aaKnown RBP16.78■□□□□ 0.28
CDH3-204ENST00000565453 DLATP10515 647 aaKnown RBP16.78■□□□□ 0.28
CDH3-204ENST00000565453 CHRNB1P11230 501 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 TNNI1P19237 187 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 CMA1P23946 247 aa16.78■□□□□ 0.28
CDH3-204ENST00000565453 CCNE1P24864 410 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms