RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 RIPOR3Q96MK2 946 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 ZSWIM1Q9BR11 485 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 REXO4Q9GZR2 422 aaKnown RBP5.46□□□□□ -1.54
CHD9-215ENST00000565442 SMURF2Q9HAU4 748 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 PNPLA8Q9NP80 782 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 COL20A1Q9P218 1284 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 TAGLN3Q9UI15 199 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 DMTF1Q9Y222 760 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 PLEKHM1Q9Y4G2 1056 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 TRIM43BA6NCK2 446 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 TMEM233B4DJY2 109 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 RASA4BC9J798 803 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 RASA4O43374 803 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 LDHAP00338 332 aaKnown RBP5.45□□□□□ -1.54
CHD9-215ENST00000565442 PIM1P11309 404 aaPredicted RBP5.45□□□□□ -1.54
CHD9-215ENST00000565442 HTR3AP46098 478 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 STT3AP46977 705 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 AVPR1BP47901 424 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 SLC11A2P49281 568 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 C10orf62Q5T681 223 aaPredicted RBP5.45□□□□□ -1.54
CHD9-215ENST00000565442 KLHDC7AQ5VTJ3 777 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 LMBRD2Q68DH5 695 aaPredicted RBP5.45□□□□□ -1.54
CHD9-215ENST00000565442 SLC30A10Q6XR72 485 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 MICALCLQ6ZW33 695 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 RHOT2Q8IXI1 618 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 SPICE1Q8N0Z3 855 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 CFAP52Q8N1V2 620 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 SLC15A4Q8N697 577 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 DNAJC5GQ8N7S2 189 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 OR56A1Q8NGH5 318 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 DDX17Q92841 729 aaKnown RBP5.45□□□□□ -1.54
CHD9-215ENST00000565442 TRIM43Q96BQ3 446 aaPredicted RBP5.45□□□□□ -1.54
CHD9-215ENST00000565442 PSMD1Q99460 953 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 SLC46A2Q9BY10 475 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 TEX101Q9BY14 249 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 DPH1Q9BZG8 443 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 WDR11Q9BZH6 1224 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 SYBUQ9NX95 663 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 TRPM5Q9NZQ8 1165 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 ANKFY1Q9P2R3 1169 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 ATP11BQ9Y2G3 1177 aa5.45□□□□□ -1.54
CHD9-215ENST00000565442 COL11A2P13942 1736 aaPredicted RBP5.45□□□□□ -1.54
CHD9-215ENST00000565442 POLR2AP24928 1970 aaKnown RBP5.44□□□□□ -1.54
CHD9-215ENST00000565442 A0A1B0GTW7 788 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 AHRRA9YTQ3 701 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 MYO1CO00159 1063 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 TPD52L2O43399 206 aaKnown RBP5.44□□□□□ -1.54
CHD9-215ENST00000565442 NCK2O43639 380 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 IL18RAPO95256 599 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 CHEK2O96017 543 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 THP07101 528 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 TNFSF4P23510 183 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 HSD11B2P80365 405 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 MXRA7P84157 204 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 RAB32Q13637 225 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 DAG1Q14118 895 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 AMOTQ4VCS5 1084 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 PDCD4Q53EL6 469 aaKnown RBP5.44□□□□□ -1.54
CHD9-215ENST00000565442 PRR16Q569H4 304 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.44□□□□□ -1.54
CHD9-215ENST00000565442 TOGARAM2Q6ZUX3 1019 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 LCORLQ8N3X6 602 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 OR2C3Q8N628 320 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 ACRBPQ8NEB7 543 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 VPS37AQ8NEZ2 397 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 NMD3Q96D46 503 aaKnown RBP5.44□□□□□ -1.54
CHD9-215ENST00000565442 SGCZQ96LD1 299 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 PNKPQ96T60 521 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 CNPPD1Q9BV87 410 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 UNKQ9C0B0 810 aaKnown RBP5.44□□□□□ -1.54
CHD9-215ENST00000565442 SIK2Q9H0K1 926 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 VSX1Q9NZR4 365 aaPredicted RBP5.44□□□□□ -1.54
CHD9-215ENST00000565442 HSFX1Q9UBD0 423 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 TMX2Q9Y320 296 aa5.44□□□□□ -1.54
CHD9-215ENST00000565442 TMEM200CA6NKL6 621 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 FOXN3O00409 490 aaPredicted RBP5.43□□□□□ -1.54
CHD9-215ENST00000565442 POLRMTO00411 1230 aaKnown RBP5.43□□□□□ -1.54
CHD9-215ENST00000565442 PARP1P09874 1014 aaKnown RBP5.43□□□□□ -1.54
CHD9-215ENST00000565442 TSHRP16473 764 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 CHRM3P20309 590 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 FGFR4P22455 802 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 FDXRP22570 491 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 POU6F2P78424 691 aaPredicted RBP5.43□□□□□ -1.54
CHD9-215ENST00000565442 FAM189BP81408 668 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 MORC3Q14149 939 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 ERCC6LQ2NKX8 1250 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 SLC44A4Q53GD3 710 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 FAM209BQ5JX69 171 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 FAM160B1Q5W0V3 765 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 TAPT1Q6NXT6 567 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 GDF7Q7Z4P5 450 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 DPP9Q86TI2 863 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 MICU3Q86XE3 530 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 ARHGEF19Q8IW93 802 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 LRIG1Q96JA1 1093 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 MSLNLQ96KJ4 702 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 TRIB1Q96RU8 372 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 DCLRE1CQ96SD1 692 aaKnown RBP5.43□□□□□ -1.54
CHD9-215ENST00000565442 SMOQ99835 787 aa5.43□□□□□ -1.54
CHD9-215ENST00000565442 ZNF518BQ9C0D4 1074 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms