RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 GCNAQ96QF7 691 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 C7orf25Q9BPX7 421 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 TMLHEQ9NVH6 421 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 ABI2Q9NYB9 513 aaPredicted RBP19.89■□□□□ 0.77
CLN6-204ENST00000564752 RBAKQ9NYW8 714 aaPredicted RBP19.89■□□□□ 0.77
CLN6-204ENST00000564752 NCDNQ9UBB6 729 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 SMG5Q9UPR3 1016 aaKnown RBP19.89■□□□□ 0.77
CLN6-204ENST00000564752 PCDHB5Q9Y5E4 795 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 CEP250Q9BV73 2442 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 SPECC1L-ADORA2AF8WAN1 911 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 EXTL3O43909 919 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 ITGB3P05106 788 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 HMGA1P17096 107 aaKnown RBP19.88■□□□□ 0.77
CLN6-204ENST00000564752 CXCL12P48061 93 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 PLCB2Q00722 1185 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 TSPY1Q01534 308 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 WDR44Q5JSH3 913 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 FAM26FQ5R3K3 315 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 SCARA3Q6AZY7 606 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 TXNDC11Q6PKC3 985 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 DGLUCYQ7Z3D6 616 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 TMEM150AQ86TG1 271 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 CEP57L1Q8IYX8 460 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 PDCL2Q8N4E4 241 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 SPEM1Q8N4L4 309 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 LRRC52Q8N7C0 313 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 GLIS3Q8NEA6 775 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 TTC8Q8TAM2 541 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 BPIFB1Q8TDL5 484 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 NOC3LQ8WTT2 800 aaKnown RBP19.88■□□□□ 0.77
CLN6-204ENST00000564752 SPATA32Q96LK8 384 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 ACBD6Q9BR61 282 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 CBWD1Q9BRT8 395 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 GTSE1Q9NYZ3 720 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 ZMYM5Q9UJ78 669 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 L1RE1Q9UN81 338 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 ZDHHC9Q9Y397 364 aa19.88■□□□□ 0.77
CLN6-204ENST00000564752 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.87■□□□□ 0.77
CLN6-204ENST00000564752 GOLGA8IPA6NC78 632 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 GOLGA8JA6NMD2 632 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 EIF3DO15371 548 aaKnown RBP eCLIP19.87■□□□□ 0.77
CLN6-204ENST00000564752 F11P03951 625 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 CTHP32929 405 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 SATB1Q01826 763 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 LRRC32Q14392 662 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 PUM1Q14671 1186 aaKnown RBP eCLIP19.87■□□□□ 0.77
CLN6-204ENST00000564752 NFE2Q16621 373 aaPredicted RBP19.87■□□□□ 0.77
CLN6-204ENST00000564752 DGKKQ5KSL6 1271 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 UNC13DQ70J99 1090 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 CMTM8Q8IZV2 173 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 TMEM86AQ8N2M4 240 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 CSGALNACT2Q8N6G5 542 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 GPR161Q8N6U8 529 aaKnown RBP19.87■□□□□ 0.77
CLN6-204ENST00000564752 CELF5Q8N6W0 485 aaKnown RBP19.87■□□□□ 0.77
CLN6-204ENST00000564752 LEO1Q8WVC0 666 aaPredicted RBP19.87■□□□□ 0.77
CLN6-204ENST00000564752 PI4K2AQ9BTU6 479 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 BLZF1Q9H2G9 400 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 PCIF1Q9H4Z3 704 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 PDE11AQ9HCR9 933 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 RBM12Q9NTZ6 932 aaKnown RBP19.87■□□□□ 0.77
CLN6-204ENST00000564752 ITGA11Q9UKX5 1188 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 ATP6V1DQ9Y5K8 247 aa19.87■□□□□ 0.77
CLN6-204ENST00000564752 KIAA0391O15091 583 aaKnown RBP19.86■□□□□ 0.77
CLN6-204ENST00000564752 HUS1O60921 280 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 CASP1P29466 404 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 AFMP43652 599 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 NLRP12P59046 1061 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 RBP5P82980 135 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 TNK2Q07912 1038 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 BECN1Q14457 450 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 GPD1LQ8N335 351 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 SECISBP2LQ93073 1101 aaKnown RBP19.86■□□□□ 0.77
CLN6-204ENST00000564752 FAM84AQ96KN4 292 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 SMG9Q9H0W8 520 aaKnown RBP19.86■□□□□ 0.77
CLN6-204ENST00000564752 THG1LQ9NWX6 298 aaKnown RBP19.86■□□□□ 0.77
CLN6-204ENST00000564752 GDAP2Q9NXN4 497 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 DDX43Q9NXZ2 648 aaKnown RBP19.86■□□□□ 0.77
CLN6-204ENST00000564752 DLL3Q9NYJ7 618 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 SIX4Q9UIU6 781 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 TICRRQ7Z2Z1 1910 aa19.86■□□□□ 0.77
CLN6-204ENST00000564752 UBE4BO95155 1302 aa19.85■□□□□ 0.77
CLN6-204ENST00000564752 MED19A0JLT2 244 aaPredicted RBP19.85■□□□□ 0.77
CLN6-204ENST00000564752 SOBPA7XYQ1 873 aa19.85■□□□□ 0.77
CLN6-204ENST00000564752 PRPF40AO75400 957 aaKnown RBP19.85■□□□□ 0.77
CLN6-204ENST00000564752 PAPSS2O95340 614 aaPredicted RBP19.85■□□□□ 0.77
CLN6-204ENST00000564752 DDX6P26196 483 aaKnown RBP eCLIP19.85■□□□□ 0.77
CLN6-204ENST00000564752 GPR15P49685 360 aa19.85■□□□□ 0.77
CLN6-204ENST00000564752 BFSP1Q12934 665 aa19.85■□□□□ 0.77
CLN6-204ENST00000564752 SPATA18Q8TC71 538 aa19.85■□□□□ 0.77
CLN6-204ENST00000564752 CHAMP1Q96JM3 812 aa19.85■□□□□ 0.77
CLN6-204ENST00000564752 PKMYT1Q99640 499 aa19.85■□□□□ 0.77
CLN6-204ENST00000564752 SERTAD1Q9UHV2 236 aa19.85■□□□□ 0.77
CLN6-204ENST00000564752 KRT19P08727 400 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 SLFN14P0C7P3 912 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 CSH1P0DML2 217 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 CSH2P0DML3 217 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 PFKFB1P16118 471 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 ACAT1P24752 427 aaKnown RBP19.84■□□□□ 0.77
CLN6-204ENST00000564752 CYP2F1P24903 491 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 AVPR1AP37288 418 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms