RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 PCDHGC3Q9UN70 934 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 ADM5C9JUS6 153 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 POC1B-GALNT4F8VUJ3 575 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 CSDE1O75534 798 aaKnown RBP23.55■■□□□ 1.36
SPSB3-206ENST00000564709 GCAP28676 217 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 TAB3Q8N5C8 712 aaPredicted RBP23.55■■□□□ 1.36
SPSB3-206ENST00000564709 EMC1Q8N766 993 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 FGD4Q96M96 766 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 SPATA33Q96N06 139 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 TGS1Q96RS0 853 aaKnown RBP23.55■■□□□ 1.36
SPSB3-206ENST00000564709 ADAM33Q9BZ11 813 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 ZNF518BQ9C0D4 1074 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 AGTPBP1Q9UPW5 1226 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 CSADQ9Y600 493 aa23.55■■□□□ 1.36
SPSB3-206ENST00000564709 SPAG7O75391 227 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 CNMDO75829 334 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 PROZP22891 400 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 IL1R2P27930 398 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 CDH5P33151 784 aaPredicted RBP23.54■■□□□ 1.36
SPSB3-206ENST00000564709 CELF3Q5SZQ8 465 aaKnown RBP23.54■■□□□ 1.36
SPSB3-206ENST00000564709 DRICH1Q6PGQ1 229 aaPredicted RBP23.54■■□□□ 1.36
SPSB3-206ENST00000564709 ARFGAP1Q8N6T3 406 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 HMGXB4Q9UGU5 601 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 USP15Q9Y4E8 981 aaPredicted RBP23.54■■□□□ 1.36
SPSB3-206ENST00000564709 IGKV6-21A0A0C4DH24 114 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 TSHZ1Q6ZSZ6 1077 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 ZBED8Q8IZ13 594 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 NLGN2Q8NFZ4 835 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 CCHCR1Q8TD31 782 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 CFAP57Q96MR6 1250 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 PAIP2Q9BPZ3 127 aaKnown RBP23.54■■□□□ 1.36
SPSB3-206ENST00000564709 SDCBP2Q9H190 292 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 ASCC2Q9H1I8 757 aaPredicted RBP23.54■■□□□ 1.36
SPSB3-206ENST00000564709 VPS37BQ9H9H4 285 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 KIF9Q9HAQ2 790 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 PTPRHQ9HD43 1115 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 TXNRD2Q9NNW7 524 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 DDX56Q9NY93 547 aaKnown RBP23.54■■□□□ 1.36
SPSB3-206ENST00000564709 SLC12A4Q9UP95 1085 aa23.54■■□□□ 1.36
SPSB3-206ENST00000564709 C3orf70A6NLC5 250 aaPredicted RBP23.53■■□□□ 1.36
SPSB3-206ENST00000564709 DNAJC8O75937 253 aaPredicted RBP23.53■■□□□ 1.36
SPSB3-206ENST00000564709 NFICP08651 508 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 KRT3P12035 628 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 GTF2A1P52655 376 aaPredicted RBP23.53■■□□□ 1.36
SPSB3-206ENST00000564709 COPS2P61201 443 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 TAP1Q03518 808 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 GAD2Q05329 585 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 SURF1Q15526 300 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 KIAA0319LQ8IZA0 1049 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 NIPA2Q8N8Q9 360 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 C2orf40Q9H1Z8 148 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 CDT1Q9H211 546 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 SMYD3Q9H7B4 428 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 NKIRAS1Q9NYS0 192 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 ACKR2O00590 384 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 LRCH4O75427 683 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 LGR5O75473 907 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 ABHD2P08910 425 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 IQCF3P0C7M6 154 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 GDF10P55107 478 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 PSMC1P62191 440 aaKnown RBP23.53■■□□□ 1.36
SPSB3-206ENST00000564709 SLC25A11Q02978 314 aaKnown RBP23.53■■□□□ 1.36
SPSB3-206ENST00000564709 XRCC4Q13426 336 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 RNASEH2BQ5TBB1 312 aaKnown RBP23.53■■□□□ 1.36
SPSB3-206ENST00000564709 ANKMY2Q8IV38 441 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 CLMNQ96JQ2 1002 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 TWNKQ96RR1 684 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 CPXM1Q96SM3 734 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 METTL5Q9NRN9 209 aaKnown RBP23.53■■□□□ 1.36
SPSB3-206ENST00000564709 SIX4Q9UIU6 781 aa23.53■■□□□ 1.36
SPSB3-206ENST00000564709 UBOX5O94941 541 aa23.52■■□□□ 1.36
SPSB3-206ENST00000564709 CD48P09326 243 aa23.52■■□□□ 1.36
SPSB3-206ENST00000564709 IGBP1P78318 339 aa23.52■■□□□ 1.36
SPSB3-206ENST00000564709 OTUD4Q01804 1114 aaKnown RBP23.52■■□□□ 1.36
SPSB3-206ENST00000564709 WDR78Q5VTH9 848 aa23.52■■□□□ 1.36
SPSB3-206ENST00000564709 EFCAB12Q6NXP0 572 aa23.52■■□□□ 1.36
SPSB3-206ENST00000564709 DHX37Q8IY37 1157 aaKnown RBP23.52■■□□□ 1.36
SPSB3-206ENST00000564709 MAML1Q92585 1016 aa23.52■■□□□ 1.36
SPSB3-206ENST00000564709 AGAP1Q9UPQ3 857 aa23.52■■□□□ 1.36
SPSB3-206ENST00000564709 HGSO14964 777 aaPredicted RBP23.51■■□□□ 1.35
SPSB3-206ENST00000564709 PTPN7P35236 360 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 MTM1Q13496 603 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 ACTL9Q8TC94 416 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 NKD2Q969F2 451 aaPredicted RBP23.51■■□□□ 1.35
SPSB3-206ENST00000564709 SGSM3Q96HU1 749 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 FOXP3Q9BZS1 431 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 SYNCQ9H7C4 482 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 PCSK1NQ9UHG2 260 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 DRG1Q9Y295 367 aaKnown RBP23.51■■□□□ 1.35
SPSB3-206ENST00000564709 B4GALT4O60513 344 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 ERBB2P04626 1255 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 ITGAVP06756 1048 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 RAD23BP54727 409 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 YWHAEP62258 255 aaKnown RBP23.51■■□□□ 1.35
SPSB3-206ENST00000564709 MBTD1Q05BQ5 628 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 PDIA2Q13087 525 aaKnown RBP23.51■■□□□ 1.35
SPSB3-206ENST00000564709 MORF4L2Q15014 288 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 ZNF667Q5HYK9 610 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 CGB2Q6NT52 195 aa23.51■■□□□ 1.35
SPSB3-206ENST00000564709 ARHGEF18Q6ZSZ5 1173 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms