RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CNTN6Q9UQ52 1028 aa7.9□□□□□ -1.14
MAP1LC3B-205ENST00000564638 TRIOO75962 3097 aa7.9□□□□□ -1.14
MAP1LC3B-205ENST00000564638 DCHS1Q96JQ0 3298 aa7.9□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PDCD11Q14690 1871 aaKnown RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FAM170AA1A519 330 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CCDC66A2RUB6 948 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 B4GALT5O43286 388 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 THAP12O43422 761 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TLL1O43897 1013 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FGGP02679 453 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CYP1A1P04798 512 aaPredicted RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MYOGP15173 224 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CTNNA2P26232 953 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PBX2P40425 430 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RNASE9P60153 205 aaKnown RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MYL6P60660 151 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FAM193AP78312 1265 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SLC7A5Q01650 507 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 POU5F1Q01860 360 aaKnown RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CENPCQ03188 943 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NNTQ13423 1086 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DSC3Q14574 896 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MESDQ14696 234 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RAB30Q15771 203 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SGSM1Q2NKQ1 1148 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZNF699Q32M78 642 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NAA35Q5VZE5 725 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SND1Q7KZF4 910 aaKnown RBP eCLIP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RTN4RL1Q86UN2 441 aaPredicted RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CDR2LQ86X02 465 aaPredicted RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HERC6Q8IVU3 1022 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GSPT2Q8IYD1 628 aaKnown RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MCOLN2Q8IZK6 566 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 UBR7Q8N806 425 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CCDC26Q8TAB7 109 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PHOSPHO2Q8TCD6 241 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ELMO3Q96BJ8 720 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 YME1L1Q96TA2 773 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PLVAPQ9BX97 442 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 UBXN6Q9BZV1 441 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TSPYL2Q9H2G4 693 aaPredicted RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NKX2-4Q9H2Z4 354 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PTPRHQ9HD43 1115 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ACP6Q9NPH0 428 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MED4Q9NPJ6 270 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DMGDHQ9UI17 866 aaKnown RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ARIH1Q9Y4X5 557 aaPredicted RBP7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NUB1Q9Y5A7 615 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ALG6Q9Y672 507 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SCINQ9Y6U3 715 aa7.89□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TRIP11Q15643 1979 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RAD51CO43502 376 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TSPAN1O60635 241 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 LSM8O95777 96 aaKnown RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 STAG3L1P0CL83 205 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CXCL8P10145 99 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MYBL2P10244 700 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 UNGP13051 313 aaPredicted RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 COMTP21964 271 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DNAJB2P25686 324 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CTNNA1P35221 906 aaKnown RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SLC1A1P43005 524 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZNF132P52740 706 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 OSTNP61366 133 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NOMO3P69849 1222 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SMAD3P84022 425 aaKnown RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GUCY2DQ02846 1103 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CUL1Q13616 776 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DCAF4L1Q3SXM0 396 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PAN2Q504Q3 1202 aaKnown RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DCAF12L1Q5VU92 463 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SLC24A5Q71RS6 500 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NPAS4Q8IUM7 802 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 EFCAB13Q8IY85 973 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GOLGA6L1Q8N7Z2 621 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 EIF1ADQ8N9N8 165 aaKnown RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FAM71BQ8TC56 605 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 WHAMMQ8TF30 809 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HDAC7Q8WUI4 952 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ALG3Q92685 438 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CAVIN3Q969G5 261 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TIFAQ96CG3 184 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 VCPIP1Q96JH7 1222 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 C11orf70Q9BRQ4 267 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ADPGKQ9BRR6 497 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 APOL6Q9BWW8 343 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 AP1M1Q9BXS5 423 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PBX4Q9BYU1 374 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TRIM6Q9C030 488 aaPredicted RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PDZD7Q9H5P4 517 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 EPB41L5Q9HCM4 733 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MRPL47Q9HD33 250 aaKnown RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GDF3Q9NR23 364 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RGS18Q9NS28 235 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 LCMT1Q9UIC8 334 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RASAL2Q9UJF2 1139 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ANAPC7Q9UJX3 599 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms