RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 ASS1P00966 412 aaKnown RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 TAC1P20366 129 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 OTUD4Q01804 1114 aaKnown RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 OVGP1Q12889 678 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 MMRN1Q13201 1228 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 R3HDM1Q15032 1099 aaKnown RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 SLC1A5Q15758 541 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 FNBP1LQ5T0N5 605 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 SLFN12LQ6IEE8 588 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 ZNF449Q6P9G9 518 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 GADL1Q6ZQY3 521 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 ECHDC2Q86YB7 292 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 ARFGAP1Q8N6T3 406 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 UBA3Q8TBC4 463 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 TWNKQ96RR1 684 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 CCDC77Q9BR77 488 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 TRABDQ9H4I3 376 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 SOWAHBA6NEL2 793 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 DNALI1O14645 258 aaPredicted RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 DNAJC8O75937 253 aaPredicted RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 FGFR1P11362 822 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 MAN1A1P33908 653 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 RTP1P59025 263 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 C1QBPQ07021 282 aaKnown RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 LAMTOR4Q0VGL1 99 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 MOB2Q70IA6 237 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 ZCCHC9Q8N567 271 aaKnown RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 FAM71DQ8N9W8 422 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 MINDY3Q9H8M7 445 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 METTL5Q9NRN9 209 aaKnown RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 STYXL1Q9Y6J8 313 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 RGPD3A6NKT7 1758 aaPredicted RBP14.2□□□□□ -0.14
CLK3-215ENST00000564353 RGPD4Q7Z3J3 1758 aa14.2□□□□□ -0.14
CLK3-215ENST00000564353 hCG_1818297A0A087WSY0 165 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 F5H423 210 aaPredicted RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 MSCO60682 206 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 PRKCBP05771 671 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 TBXAS1P24557 533 aaPredicted RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 ATP5DP30049 168 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 BASP1P80723 227 aaKnown RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 BBS9Q3SYG4 887 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 RCOR2Q8IZ40 523 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 ALLCQ8N6M5 410 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 ANKLE1Q8NAG6 615 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 KLRG1Q96E93 195 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 CPXM1Q96SM3 734 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 MAK16Q9BXY0 300 aaKnown RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 NFASCO94856 1347 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 FAM47DPA6NHR8 397 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 AVILO75366 819 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 STAM2O75886 525 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 TARSP26639 723 aaKnown RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 CETN2P41208 172 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 CTCFP49711 727 aaPredicted RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 PSMC1P62191 440 aaKnown RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 FAXCQ5TGI0 409 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 XRRA1Q6P2D8 792 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 ARHGEF18Q6ZSZ5 1173 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 CROCCP2Q86T23 111 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 TMEM35BQ8NCS4 154 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 MAML1Q92585 1016 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 CCDC134Q9H6E4 229 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 SMYD3Q9H7B4 428 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 COL11A1P12107 1806 aaPredicted RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 OAS1P00973 400 aaKnown RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 GHRP10912 638 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 KRT3P12035 628 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 KRT4P19013 534 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 CDKN2BP42772 138 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 MYO1EQ12965 1108 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 EAPPQ56P03 285 aaPredicted RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 TFDP3Q5H9I0 405 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 SYDE1Q6ZW31 735 aaPredicted RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 BRSK2Q8IWQ3 736 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 UNC45BQ8IWX7 931 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 FBXO16Q8IX29 292 aaPredicted RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 ERP27Q96DN0 273 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 PIWIL1Q96J94 861 aaKnown RBP14.19□□□□□ -0.14
CLK3-215ENST00000564353 NIF3L1Q9GZT8 377 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 DCTN4Q9UJW0 460 aa14.19□□□□□ -0.14
CLK3-215ENST00000564353 H0YCG3 227 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 LDHAP00338 332 aaKnown RBP14.18□□□□□ -0.14
CLK3-215ENST00000564353 NFICP08651 508 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 IQCF3P0C7M6 154 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 GPX6P59796 221 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 DUOXA2Q1HG44 320 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 RFX6Q8HWS3 928 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 ZNF513Q8N8E2 541 aaPredicted RBP14.18□□□□□ -0.14
CLK3-215ENST00000564353 AGAP11Q8TF27 550 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 CPB2Q96IY4 423 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 RBM41Q96IZ5 413 aaKnown RBP14.18□□□□□ -0.14
CLK3-215ENST00000564353 NRBP2Q9NSY0 501 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 HOXC10Q9NYD6 342 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 KLHL14Q9P2G3 628 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 ARL2BPQ9Y2Y0 163 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 MGRN1O60291 552 aa14.18□□□□□ -0.14
CLK3-215ENST00000564353 FAM189A1O60320 539 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms