RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ZNF750Q32MQ0 723 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 ZNF568Q3ZCX4 644 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 RAP1GAP2Q684P5 730 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 SULT6B1Q6IMI4 303 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 CRTC1Q6UUV9 634 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 PDPRQ8NCN5 879 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 TBC1D15Q8TC07 691 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 RSC1A1Q92681 617 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 SDCCAG3Q96C92 435 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 ZSCAN31Q96LW9 406 aaPredicted RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 PPP1R9BQ96SB3 815 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 EIF2AK1Q9BQI3 630 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.02□□□□□ -1.931e-6■■■■□ 21.4
CHD9-209ENST00000564255 ZBTB26Q9HCK0 441 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 WASH6PQ9NQA3 447 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 CNOT6Q9ULM6 557 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 A0A0B4J269 797 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 LOC102723971A0A1B0GUV8 181 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 DRGXA6NNA5 263 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 RHOBTB3O94955 611 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 CKMT1AP12532 417 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 TNFAIP3P21580 790 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 SLC5A2P31639 672 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 SLURP1P55000 103 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 KIAA2012Q0VF49 1180 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 DDX10Q13206 875 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 ARHGAP15Q53QZ3 475 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 NOMO2Q5JPE7 1267 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 MFSD5Q6N075 450 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 LINC01356Q8N9X3 169 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 TFAP2CQ92754 450 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 PRPF18Q99633 342 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 IMPG2Q9BZV3 1241 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 PCDHAC1Q9H158 963 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 TP63Q9H3D4 680 aaPredicted RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 UNC45AQ9H3U1 944 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 VSX1Q9NZR4 365 aaPredicted RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 DNMT3BQ9UBC3 853 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 HDAC9Q9UKV0 1011 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 OAZ3Q9UMX2 235 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 SMG5Q9UPR3 1016 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 MTO1Q9Y2Z2 717 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 AQP7P3A6NL99 342 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 PRR5-ARHGAP8B1AHC4 643 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 RAB27BO00194 218 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 PCDH17O14917 1159 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 ASNA1O43681 348 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 GEMIN4P57678 1058 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 HYIQ5T013 277 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 RETSATQ6NUM9 610 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 EFCAB12Q6NXP0 572 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 TMTC1Q8IUR5 882 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 FTSJ3Q8IY81 847 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 OR1N1Q8NGS0 311 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 HERVK_113Q902F9 699 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 SKA1Q96BD8 255 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 FAM167BQ9BTA0 163 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 TLR10Q9BXR5 811 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 SLC46A2Q9BY10 475 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 FAM83DQ9H4H8 585 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 MLXIPQ9HAP2 919 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 KIF17Q9P2E2 1029 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 ATP11BQ9Y2G3 1177 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 TMEM98Q9Y2Y6 226 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 A0A1W2PRX2 142 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 NOBOXO60393 691 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 ATXN1LP0C7T5 689 aaKnown RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 PECAM1P16284 738 aaPredicted RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 TPH1P17752 444 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 ADD2P35612 726 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 IRAK1P51617 712 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 EPHB4P54760 987 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 RAC3P60763 192 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 FOXD4Q12950 439 aaPredicted RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 CNGB1Q14028 1251 aaPredicted RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 IQCB1Q15051 598 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 ZIK1Q3SY52 487 aaPredicted RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 MRNIPQ6NTE8 343 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 ATG14Q6ZNE5 492 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 PLEKHH3Q7Z736 793 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 GATAD2AQ86YP4 633 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 CPOQ8IVL8 374 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 CCDC28AQ8IWP9 274 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 CFAP52Q8N1V2 620 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 BHLHE22Q8NFJ8 381 aaPredicted RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 MDGA1Q8NFP4 955 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 FAM84AQ96KN4 292 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 FAM227BQ96M60 508 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 SLC46A1Q96NT5 459 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 CPPED1Q9BRF8 314 aaPredicted RBP3.01□□□□□ -1.93
CHD9-209ENST00000564255 ZHX3Q9H4I2 956 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 GGA3Q9NZ52 723 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 SCINQ9Y6U3 715 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 B9A039 149 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 H7C4K7 107 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 DHHO43323 396 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 B4GALT4O60513 344 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 SOAT2O75908 522 aa3.01□□□□□ -1.93
CHD9-209ENST00000564255 NTSR2O95665 410 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms