RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 HEATR6Q6AI08 1181 aaKnown RBP13.18□□□□□ -0.3
COMMD4-209ENST00000564068 TTC27Q6P3X3 843 aa13.18□□□□□ -0.3
COMMD4-209ENST00000564068 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
COMMD4-209ENST00000564068 DHX35Q9H5Z1 703 aaKnown RBP13.18□□□□□ -0.3
COMMD4-209ENST00000564068 SAR1AQ9NR31 198 aa13.18□□□□□ -0.3
COMMD4-209ENST00000564068 TAGLN3Q9UI15 199 aa13.18□□□□□ -0.3
COMMD4-209ENST00000564068 ANKRD63C9JTQ0 380 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 ARP10275 920 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 VCAM1P19320 739 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 SLC12A1Q13621 1099 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 NCOA4Q13772 614 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 SEZ6Q53EL9 994 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 EFHC1Q5JVL4 640 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 TCHHL1Q5QJ38 904 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 FAM160B2Q86V87 743 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 ETNPPLQ8TBG4 499 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 EPS8L1Q8TE68 723 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 SDCCAG3Q96C92 435 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 AURKCQ9UQB9 309 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 ANKRD26Q9UPS8 1709 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 DDX3YO15523 660 aaKnown RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 SOX11P35716 441 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 JAK3P52333 1124 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 MRPS9P82933 396 aaKnown RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 AP1B1Q10567 949 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 FLOT2Q14254 428 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 PIGHQ14442 188 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 TTC39BQ5VTQ0 682 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 GPAT2Q6NUI2 795 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 RYBPQ8N488 228 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 ZSWIM2Q8NEG5 633 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 GABPB2Q8TAK5 448 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 C20orf96Q9NUD7 363 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 GOLGA8QA0A0J9YX86 632 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 FAM237BA0A1B0GVD1 139 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 A0A1W2PPM1 405 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 GOLGA8OA6NCC3 632 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 GOLGA8NF8WBI6 632 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 DNALI1O14645 258 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 BANF1O75531 89 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 NUDT2P50583 147 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 ATP13A4Q4VNC1 1196 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 MFSD7Q6UXD7 560 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 OTOAQ7RTW8 1153 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 EXT2Q93063 718 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 CLMNQ96JQ2 1002 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 AGAP3Q96P47 875 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 ZNF317Q96PQ6 595 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 UNC45AQ9H3U1 944 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 KLHL8Q9P2G9 620 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 SAE1Q9UBE0 346 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-209ENST00000564068 ARHGAP26Q9UNA1 814 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 SLC12A4Q9UP95 1085 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 ASTN1O14525 1302 aa13.17□□□□□ -0.3
COMMD4-209ENST00000564068 SDC4P31431 198 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 ITKQ08881 620 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 PTK6Q13882 451 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 ZCCHC23Q6ZST2 131 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 MCOLN2Q8IZK6 566 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 CCDC33Q8N5R6 958 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 TMEM143Q96AN5 459 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 KLHL4Q9C0H6 718 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 DNAJC16Q9Y2G8 782 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 SLC26A4O43511 780 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 PSTPIP1O43586 416 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 PDGFRAP16234 1089 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 KRT76Q01546 638 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 NFIAQ12857 509 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 PDK4Q16654 411 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 KIF19Q2TAC6 998 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 COBLL1Q53SF7 1204 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 LRRC8EQ6NSJ5 796 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 DEFB107AQ8IZN7 70 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 RTFDC1Q9BY42 306 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-209ENST00000564068 ING2Q9H160 280 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 C12orf65Q9H3J6 166 aaKnown RBP13.16□□□□□ -0.3
COMMD4-209ENST00000564068 ZNF212Q9UDV6 495 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 MID2Q9UJV3 735 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 ZBTB17Q13105 803 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 ARSHQ5FYA8 562 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 RNF148Q8N7C7 305 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 EXD1Q8NHP7 514 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 ZNF570Q96NI8 536 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 GCNAQ96QF7 691 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 KCNH7Q9NS40 1196 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 COG5Q9UP83 839 aa13.16□□□□□ -0.3
COMMD4-209ENST00000564068 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 SKIV2L2P42285 1042 aaKnown RBP13.15□□□□□ -0.3
COMMD4-209ENST00000564068 CDK16Q00536 496 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 GRIK5Q16478 980 aa13.15□□□□□ -0.3
COMMD4-209ENST00000564068 PARP6Q2NL67 630 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms