RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RCOR1Q9UKL0 485 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 GTF3C4Q9UKN8 822 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 NCAM2O15394 837 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 PRAMEF12O95522 483 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 SPATA2LQ8IUW3 424 aaPredicted RBP18.97■□□□□ 0.63
NME3-205ENST00000563854 TOP6BLQ8N6T0 577 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 XXYLT1Q8NBI6 393 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 TTC8Q8TAM2 541 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 ZFYVE19Q96K21 471 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 SPATA32Q96LK8 384 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 MMS19Q96T76 1030 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 NELL2Q99435 816 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 ACBD6Q9BR61 282 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 SMG9Q9H0W8 520 aaKnown RBP18.97■□□□□ 0.63
NME3-205ENST00000563854 IL21Q9HBE4 155 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 EXOC1Q9NV70 894 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 COL4A2P08572 1712 aa18.97■□□□□ 0.63
NME3-205ENST00000563854 A0A1B0GVL5 298 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 PVALEFA0A1B0GWK0 134 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 SLC38A8A6NNN8 435 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 MAN2B1O00754 1011 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 PFKFB1P16118 471 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 CYP2F1P24903 491 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 PCSK1P29120 753 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 LHX1P48742 406 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 KPNA1P52294 538 aaPredicted RBP18.96■□□□□ 0.63
NME3-205ENST00000563854 PSMC1P62191 440 aaKnown RBP18.96■□□□□ 0.63
NME3-205ENST00000563854 CYP24A1Q07973 514 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 EHHADHQ08426 723 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 DDR2Q16832 855 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 SOWAHAQ2M3V2 549 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 ZC3H14Q6PJT7 736 aaKnown RBP18.96■□□□□ 0.63
NME3-205ENST00000563854 TRAPPC11Q7Z392 1133 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 SCN4BQ8IWT1 228 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 LEO1Q8WVC0 666 aaPredicted RBP18.96■□□□□ 0.63
NME3-205ENST00000563854 FAM3CQ92520 227 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 CGRRF1Q99675 332 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 TASP1Q9H6P5 420 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 MYO15AQ9UKN7 3530 aa18.96■□□□□ 0.63
NME3-205ENST00000563854 VPS13AQ96RL7 3174 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 PATJQ8NI35 1801 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 NUP210Q8TEM1 1887 aaPredicted RBP18.95■□□□□ 0.62
NME3-205ENST00000563854 SHISA7A6NL88 538 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 ACTN4O43707 911 aaKnown RBP18.95■□□□□ 0.62
NME3-205ENST00000563854 SLFN14P0C7P3 912 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 CCNE1P24864 410 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 MAGEA9P43362 315 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 SOX9P48436 509 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 RPL10AP62906 217 aaKnown RBP18.95■□□□□ 0.62
NME3-205ENST00000563854 KRT85P78386 507 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 CSTF1Q05048 431 aaKnown RBP18.95■□□□□ 0.62
NME3-205ENST00000563854 PSMD6Q15008 389 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 KNOP1Q1ED39 458 aaKnown RBP18.95■□□□□ 0.62
NME3-205ENST00000563854 ADSSL1Q8N142 457 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 PAGE5Q96GU1 130 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 SYT15Q9BQS2 421 aa18.95■□□□□ 0.62
NME3-205ENST00000563854 MYBPHLA2RUH7 354 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 CHADO15335 359 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 EXOC3O60645 756 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 ATP2C2O75185 946 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 CSH1P0DML2 217 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 CSH2P0DML3 217 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 NLRP12P59046 1061 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 BMT2Q1RMZ1 405 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 MAML2Q8IZL2 1156 aaPredicted RBP18.94■□□□□ 0.62
NME3-205ENST00000563854 MAB21L3Q8N8X9 362 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 TTC16Q8NEE8 873 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 LRRC3BQ96PB8 259 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 TRPV5Q9NQA5 729 aa18.94■□□□□ 0.62
NME3-205ENST00000563854 ARNTLO00327 626 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 GABRDO14764 452 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 PHACTR2O75167 634 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 PDGFRBP09619 1106 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 HMGA1P17096 107 aaKnown RBP18.93■□□□□ 0.62
NME3-205ENST00000563854 LMO2P25791 158 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 AVPR1AP37288 418 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 CASP4P49662 377 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 SNRPFP62306 86 aaKnown RBP18.93■□□□□ 0.62
NME3-205ENST00000563854 TNNC1P63316 161 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 CYP27A1Q02318 531 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 FCHO2Q0JRZ9 810 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 TRPC3Q13507 836 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 KMT5BQ4FZB7 885 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 ARHGAP29Q52LW3 1261 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 TSSK4Q6SA08 328 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 DPH6Q7L8W6 267 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 SPATA18Q8TC71 538 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 BPIFB1Q8TDL5 484 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 KBTBD7Q8WVZ9 684 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 MRPS31Q92665 395 aaKnown RBP18.93■□□□□ 0.62
NME3-205ENST00000563854 MYLPFQ96A32 169 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 CLDN23Q96B33 292 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 PKMYT1Q99640 499 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 SLC46A2Q9BY10 475 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 SNX25Q9H3E2 840 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 TRPC7Q9HCX4 862 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 ABCB6Q9NP58 842 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 ZDHHC9Q9Y397 364 aa18.93■□□□□ 0.62
NME3-205ENST00000563854 KLRC4O43908 158 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 CST3P01034 146 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms