RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 PCBP1Q15365 356 aaKnown RBP eCLIP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 DDR2Q16832 855 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 KNOP1Q1ED39 458 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 TMEM240Q5SV17 173 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 ZBTB41Q5SVQ8 909 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 ATF7IP2Q5U623 682 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 TTI2Q6NXR4 508 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 CNKSR3Q6P9H4 555 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 MPZL3Q6UWV2 235 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 C11orf57Q6ZUT1 292 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 STXBP4Q6ZWJ1 553 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 FMNL3Q8IVF7 1028 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 C12orf56Q8IXR9 622 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 ZC3H3Q8IXZ2 948 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 TMEM199Q8N511 208 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 MLKLQ8NB16 471 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 SMG8Q8ND04 991 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 ZSWIM2Q8NEG5 633 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 SEPT8Q92599 483 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 PMM1Q92871 262 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 UBL7Q96S82 380 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 CBWD1Q9BRT8 395 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 IER2Q9BTL4 223 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 SRRTQ9BXP5 876 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 EIF2AQ9BY44 585 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 TMEM206Q9H813 350 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 AGPAT3Q9NRZ7 376 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 RGS18Q9NS28 235 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 ANO10Q9NW15 660 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 DMAC2Q9NW81 257 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 G3BP2Q9UN86 482 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 TRAF3IP3Q9Y228 551 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 PIN4Q9Y237 131 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 LAMA3Q16787 3333 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 CEP290O15078 2479 aa5.66□□□□□ -1.5
HERPUD1-207ENST00000563781 CHD7Q9P2D1 2997 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 LTBP2Q14767 1821 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 TRIM49BA6NDI0 452 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 MEIS3P2A8K0S8 358 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 H0YGN5 161 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 PDXKO00764 312 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 PSMA7O14818 248 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 HNRNPDLO14979 420 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 N4BP3O15049 544 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 CLIC2O15247 247 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 OGTO15294 1046 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 MEFVO15553 781 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF623O75123 536 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 LETM1O95202 739 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 NPTXRO95502 500 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 PFKMP08237 780 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ACRP10323 421 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 MCF2P10911 925 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 HARSP12081 509 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 GLB1P16278 677 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 GBP2P32456 591 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 LIG4P49917 911 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 STX17P56962 302 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF445P59923 1031 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 SNRPFP62306 86 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF252P-AS1Q0IIN9 211 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 IFRD2Q12894 506 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 PAK1Q13153 545 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 SQSTM1Q13501 440 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 NOLC1Q14978 699 aaKnown RBP eCLIP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 CCDC85BQ15834 202 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 STX1AQ16623 288 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 NFIL3Q16649 462 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 DCAF4L1Q3SXM0 396 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF568Q3ZCX4 644 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 C2orf27AQ580R0 203 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 HP1BP3Q5SSJ5 553 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 RASIP1Q5U651 963 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ANKRD34AQ69YU3 496 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ANKRD40Q6AI12 368 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 KLHL10Q6JEL2 608 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 NOTUMQ6P988 496 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 SLC27A1Q6PCB7 646 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 FBXL19Q6PCT2 694 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 FOXR2Q6PJQ5 311 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 SASS6Q6UVJ0 657 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 CRELD2Q6UXH1 353 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 LRRC55Q6ZSA7 311 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF365Q70YC5 407 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 MRPL10Q7Z7H8 261 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 ECHDC2Q86YB7 292 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 SLITRK4Q8IW52 837 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 TMEM192Q8IY95 271 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 SYCP3Q8IZU3 236 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 PHC3Q8NDX5 983 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 OR6P1Q8NGX9 317 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 THAP3Q8WTV1 239 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 TMEM174Q8WUU8 243 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 CPLX3Q8WVH0 158 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 NELFBQ8WX92 580 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 APBB2Q92870 758 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 P2RX5Q93086 422 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 BICD1Q96G01 975 aa5.65□□□□□ -1.5
HERPUD1-207ENST00000563781 DHTKD1Q96HY7 919 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms