RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 TEKT4Q8WW24 435 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 INPP5DQ92835 1189 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 ATP6V0A1Q93050 837 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 SLC7A6OSQ96CW6 309 aaPredicted RBP12.42□□□□□ -0.42
ABCA3-203ENST00000563623 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
ABCA3-203ENST00000563623 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ENO1P06733 434 aaKnown RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 KRT19P08727 400 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 GLRA2P23416 452 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 NRLP54845 237 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 VCPP55072 806 aaKnown RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 CCDC15Q0P6D6 951 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 KLF1Q13351 362 aaPredicted RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 TRPC3Q13507 836 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 MORF4L2Q15014 288 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 SNX30Q5VWJ9 437 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 CLNKQ7Z7G1 428 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 PPM1NQ8N819 430 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 FAM71DQ8N9W8 422 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ZNF606Q8WXB4 792 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 FOXP3Q9BZS1 431 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 SLC13A1Q9BZW2 595 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 DCLRE1BQ9H816 532 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ZNF70Q9UC06 446 aaPredicted RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 SRCAPQ6ZRS2 3230 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 SPATA31A6Q5VVP1 1343 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 KDM4FA0A1W2PPD8 638 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 T-ENOLP0DO92 83 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 SKIP12755 728 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 KDSRQ06136 332 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 THOC5Q13769 683 aaKnown RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 NCOA4Q13772 614 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 BAATQ14032 418 aaPredicted RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ZNF568Q3ZCX4 644 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ZBTB41Q5SVQ8 909 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ANO7Q6IWH7 933 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ZNF677Q86XU0 584 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ALLCQ8N6M5 410 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 NSL1Q96IY1 281 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 TTC1Q99614 292 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 TMEM120AQ9BXJ8 343 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ZCWPW1Q9H0M4 648 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 XPO7Q9UIA9 1087 aaKnown RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ADAMTSL1Q8N6G6 1762 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ZWINTO95229 277 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 MAP3K6O95382 1288 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ABHD2P08910 425 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 GNAT1P11488 350 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 PGM1P36871 562 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 RPS6KA3P51812 740 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 TFAMQ00059 246 aaKnown RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ORC1Q13415 861 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 C6orf163Q5TEZ5 329 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 TRIM72Q6ZMU5 477 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 MOV10L1Q9BXT6 1211 aaKnown RBP12.41□□□□□ -0.42
ABCA3-203ENST00000563623 ANKEF1Q9NU02 776 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 SCOCQ9UIL1 159 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 NUB1Q9Y5A7 615 aa12.41□□□□□ -0.42
ABCA3-203ENST00000563623 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.42
ABCA3-203ENST00000563623 H7C0C1 242 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 I3L4J1 428 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 EXTL3O43909 919 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 UBTFL6P0CB48 400 aaPredicted RBP12.4□□□□□ -0.42
ABCA3-203ENST00000563623 GCAP28676 217 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 ATP5OP48047 213 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 WNT7BP56706 349 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 PTK7Q13308 1070 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 MOGSQ13724 837 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 GPAT2Q6NUI2 795 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 EMC1Q8N766 993 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 KCTD6Q8NC69 237 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 OR5B17Q8NGF7 314 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 APOBEC3GQ9HC16 384 aaKnown RBP12.4□□□□□ -0.42
ABCA3-203ENST00000563623 CHCHD3Q9NX63 227 aaKnown RBP12.4□□□□□ -0.42
ABCA3-203ENST00000563623 SLC9A2Q9UBY0 812 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 UBIAD1Q9Y5Z9 338 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 KIF13BQ9NQT8 1826 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 B2RBV5 119 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 PIK3R2O00459 728 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 PRPF4O43172 522 aaKnown RBP eCLIP12.4□□□□□ -0.42
ABCA3-203ENST00000563623 MYL2P10916 166 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 ATP6V1C1P21283 382 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 SFNP31947 248 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
ABCA3-203ENST00000563623 TMPRSS15P98073 1019 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 PRKCEQ02156 737 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 PGM5Q15124 567 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 SLC45A4Q5BKX6 768 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 TFDP3Q5H9I0 405 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 WASHC2DQ5SRD0 308 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 FNBP1LQ5T0N5 605 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 DARS2Q6PI48 645 aaKnown RBP12.4□□□□□ -0.42
ABCA3-203ENST00000563623 B3GNT9Q6UX72 402 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 TTC7BQ86TV6 843 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 TEX9Q8N6V9 391 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 TMEM35BQ8NCS4 154 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 DENND1AQ8TEH3 1009 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 UCMAQ8WVF2 138 aa12.4□□□□□ -0.42
ABCA3-203ENST00000563623 NMRK1Q9NWW6 199 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms