RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 TARM1B6A8C7 271 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 UNC5CO95185 931 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 ALDH2P05091 517 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 CELA2AP08217 269 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 PF4V1P10720 104 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 NDUFB7P17568 137 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 LIPAP38571 399 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 SOX8P57073 446 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 LILRA4P59901 499 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 LONRF3Q496Y0 759 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 ZNF618Q5T7W0 954 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 TEDDM1Q5T9Z0 273 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 EMC10Q5UCC4 262 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 SUMO4Q6EEV6 95 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 ZNF782Q6ZMW2 699 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 GRAMD1CQ8IYS0 662 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 HPS3Q969F9 1004 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 NUP88Q99567 741 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 SLC29A3Q9BZD2 475 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 ARMT1Q9H993 441 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 AASDHPPTQ9NRN7 309 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 SERTAD3Q9UJW9 196 aa4.26□□□□□ -1.73
HMGB1P33-201ENST00000563485 H0YIZ8 118 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 ZNF213O14771 459 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 ERBB2P04626 1255 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 KCNJ5P48544 419 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 LOXL3P58215 753 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 KRTAP10-11P60412 298 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 ZNF267Q14586 743 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 FNDC1Q4ZHG4 1894 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 KHDC1LQ5JSQ8 128 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 ARHGAP40Q5TG30 622 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 ICE2Q659A1 982 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 DTX2Q86UW9 622 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 SEMA6DQ8NFY4 1073 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 PLBD2Q8NHP8 589 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 CDK5RAP3Q96JB5 506 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 ZNF778Q96MU6 729 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 NELL2Q99435 816 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 MAP3K14Q99558 947 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 CGRRF1Q99675 332 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 BRINP2Q9C0B6 783 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 SH3BP4Q9P0V3 963 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 SSX2IPQ9Y2D8 614 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 STXBP5LQ9Y2K9 1186 aa4.25□□□□□ -1.73
HMGB1P33-201ENST00000563485 WDR91A4D1P6 747 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 SLC16A3O15427 465 aaKnown RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 GRPP07492 148 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 FAM163BP0C2L3 166 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 ATXN1LP0C7T5 689 aaKnown RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 NHLRC4P0CG21 123 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 VCAM1P19320 739 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 PXNP49023 591 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 ALDH9A1P49189 494 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 ZNF81P51508 661 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 SLC10A2Q12908 348 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 GRM1Q13255 1194 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 IQCB1Q15051 598 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 LLGL1Q15334 1064 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 EZH2Q15910 746 aaKnown RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 ATAT1Q5SQI0 421 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 TREML2Q5T2D2 321 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 SFRP4Q6FHJ7 346 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 RGS7BPQ6MZT1 257 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 CEP85Q6P2H3 762 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 LAYNQ6UX15 382 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 C1QL2Q7Z5L3 287 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 VGLL2Q8N8G2 317 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 ATG4AQ8WYN0 398 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 SMG7Q92540 1137 aaKnown RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 REPS1Q96D71 796 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 PTDSS2Q9BVG9 487 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 SLC12A5Q9H2X9 1139 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 SARS2Q9NP81 518 aaKnown RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 DLL3Q9NYJ7 618 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 FLRT1Q9NZU1 646 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 ZNF70Q9UC06 446 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 CPA4Q9UI42 421 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 ANKRD6Q9Y2G4 727 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 NOP58Q9Y2X3 529 aaKnown RBP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 PLEKHM1Q9Y4G2 1056 aa4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P33-201ENST00000563485 TLR5O60602 858 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 OFD1O75665 1012 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 ABLIM3O94929 683 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 FESP07332 822 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 IL6RP08887 468 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 IBSPP21815 317 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 PPIFP30405 207 aaKnown RBP4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 CYP2C18P33260 490 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 SRSF7Q16629 238 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 PROSER3Q2NL68 480 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 AARS2Q5JTZ9 985 aaKnown RBP4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 IFIT1BQ5T764 474 aaKnown RBP4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 KIAA1614Q5VZ46 1190 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 ANKRD16Q6P6B7 361 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 SLC29A4Q7RTT9 530 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 FANCBQ8NB91 859 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 TBC1D5Q92609 795 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 MTFMTQ96DP5 389 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms