RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 LPCAT2Q7L5N7 544 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 TAS1R3Q7RTX0 852 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 HDDC3Q8N4P3 179 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 MINDY1Q8N5J2 469 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 DEPTORQ8TB45 409 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 RLN3Q8WXF3 142 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 UBL7Q96S82 380 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 GJB4Q9NTQ9 266 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 TDP1Q9NUW8 608 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 TUBGCP4Q9UGJ1 667 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 MMP17Q9ULZ9 603 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 PCDHA12Q9UN75 941 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 SLC6A14Q9UN76 642 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 PTPRQQ9UMZ3 2332 aa8.42□□□□□ -1.06
HERPUD1-206ENST00000563343 MGAQ8IWI9 3026 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 GOLGA4Q13439 2230 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 MYLKQ15746 1914 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 SH3BP5O60239 455 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 MARCH6O60337 910 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 OPHN1O60890 802 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 MED24O75448 989 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 TADA3O75528 432 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 BAG4O95429 457 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 SERPINF2P08697 491 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 HMGA1P17096 107 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 MARCKSP29966 332 aaPredicted RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 NMT1P30419 496 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 LRPAP1P30533 357 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 OPRD1P41143 372 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 YARSP54577 528 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 ZNF268Q14587 947 aaPredicted RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 PDGFRLQ15198 375 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 ZBTB6Q15916 424 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 DUOXA1Q1HG43 343 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 PIK3AP1Q6ZUJ8 805 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 GLRX5Q86SX6 157 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 SLCO6A1Q86UG4 719 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 ITIH5Q86UX2 942 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 CATSPER3Q86XQ3 398 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 TRIM22Q8IYM9 498 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 MAB21L3Q8N8X9 362 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 OR10T2Q8NGX3 314 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 CCDC43Q96MW1 224 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 ACAP3Q96P50 834 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 NAP1L4Q99733 375 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 GTPBP2Q9BX10 602 aaKnown RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 TTC12Q9H892 705 aaPredicted RBP8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 KIF9Q9HAQ2 790 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 POLD4Q9HCU8 107 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 ZMYM5Q9UJ78 669 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 RAI2Q9Y5P3 530 aa8.41□□□□□ -1.06
HERPUD1-206ENST00000563343 PHLPP2Q6ZVD8 1323 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 ARHGAP33O14559 1287 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 ATXN7O15265 892 aaPredicted RBP8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 CBFA2T3O75081 653 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 DKK1O94907 266 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 CFIP05156 583 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 MCF2P10911 925 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 RPS6KB1P23443 525 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 DPP6P42658 865 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 EFNA5P52803 228 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 NLRP12P59046 1061 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 USP4Q13107 963 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 PSMD2Q13200 908 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 SLC14A1Q13336 389 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 CAMK2BQ13554 666 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 TOB2Q14106 344 aaPredicted RBP8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 NBR1Q14596 966 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 MTF1Q14872 753 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 PPP2R5AQ15172 486 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 ZNF77Q15935 545 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 EML3Q32P44 896 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 ZNF568Q3ZCX4 644 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 C2orf27AQ580R0 203 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 LYSMD4Q5XG99 296 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 BLOC1S2Q6QNY1 142 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 PADI6Q6TGC4 694 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 TOGARAM2Q6ZUX3 1019 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 TMPRSS7Q7RTY8 843 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 LURAP1LQ8IV03 231 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 SFTPA1Q8IWL2 248 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 SCUBE3Q8IX30 993 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 ZNF843Q8N446 348 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 CPA6Q8N4T0 437 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 CCDC33Q8N5R6 958 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 OSCP1Q8WVF1 389 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 TNFRSF25Q93038 417 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 JAKMIP1Q96N16 626 aaKnown RBP8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 MTMR9Q96QG7 549 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 TARS2Q9BW92 718 aaKnown RBP8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 TUFT1Q9NNX1 390 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 TOR4AQ9NXH8 423 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 SNX14Q9Y5W7 946 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 MYH10P35580 1976 aa8.4□□□□□ -1.06
HERPUD1-206ENST00000563343 COL5A1P20908 1838 aaPredicted RBP8.39□□□□□ -1.07
HERPUD1-206ENST00000563343 K7ERI5 159 aa8.39□□□□□ -1.07
HERPUD1-206ENST00000563343 SGK1O00141 431 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms