RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TRIML1Q8N9V2 468 aa17.76■□□□□ 0.43
CDT1-202ENST00000562747 ITFG1Q8TB96 612 aa17.76■□□□□ 0.43
CDT1-202ENST00000562747 SYAP1Q96A49 352 aaPredicted RBP17.76■□□□□ 0.43
CDT1-202ENST00000562747 ZCWPW1Q9H0M4 648 aa17.76■□□□□ 0.43
CDT1-202ENST00000562747 KIAA1468Q9P260 1216 aa17.76■□□□□ 0.43
CDT1-202ENST00000562747 HSFX1Q9UBD0 423 aa17.76■□□□□ 0.43
CDT1-202ENST00000562747 CDH7Q9ULB5 785 aa17.76■□□□□ 0.43
CDT1-202ENST00000562747 INSL5Q9Y5Q6 135 aa17.76■□□□□ 0.43
CDT1-202ENST00000562747 CACNA1IQ9P0X4 2223 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 EPB41P11171 864 aaKnown RBP17.75■□□□□ 0.43
CDT1-202ENST00000562747 LHX1P48742 406 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 STARD6P59095 220 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 MCCD1P59942 119 aaPredicted RBP17.75■□□□□ 0.43
CDT1-202ENST00000562747 FKBP3Q00688 224 aaKnown RBP17.75■□□□□ 0.43
CDT1-202ENST00000562747 MYL7Q01449 175 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 ZACNQ401N2 412 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 ANKRD40Q6AI12 368 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 ADGRF2Q8IZF7 708 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 FGF13Q92913 245 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 TMEM209Q96SK2 561 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 ACBD6Q9BR61 282 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 SEMA4AQ9H3S1 761 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 VRTNQ9H8Y1 702 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 LMBRD1Q9NUN5 540 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 HCFC1R1Q9NWW0 138 aa17.75■□□□□ 0.43
CDT1-202ENST00000562747 MED19A0JLT2 244 aaPredicted RBP17.74■□□□□ 0.43
CDT1-202ENST00000562747 MTMR11A4FU01 709 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 GABRDO14764 452 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 SLC16A3O15427 465 aaKnown RBP17.74■□□□□ 0.43
CDT1-202ENST00000562747 VNN2O95498 520 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 FAM163BP0C2L3 166 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 CD44P16070 742 aaKnown RBP17.74■□□□□ 0.43
CDT1-202ENST00000562747 BMP6P22004 513 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 PMS1P54277 932 aaKnown RBP17.74■□□□□ 0.43
CDT1-202ENST00000562747 MYL6P60660 151 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 TSPY1Q01534 308 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 NCOA4Q13772 614 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 CAMK4Q16566 473 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 SOWAHAQ2M3V2 549 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 C1orf220Q5T0J3 134 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 FOXR2Q6PJQ5 311 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 DCP1BQ8IZD4 617 aaKnown RBP17.74■□□□□ 0.43
CDT1-202ENST00000562747 DCLK2Q8N568 766 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 C2orf15Q8WU43 125 aaKnown RBP17.74■□□□□ 0.43
CDT1-202ENST00000562747 PGLYRP2Q96PD5 576 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 XYLT2Q9H1B5 865 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 DDX43Q9NXZ2 648 aaKnown RBP17.74■□□□□ 0.43
CDT1-202ENST00000562747 POLIQ9UNA4 740 aa17.74■□□□□ 0.43
CDT1-202ENST00000562747 MTF2Q9Y483 593 aaPredicted RBP17.74■□□□□ 0.43
CDT1-202ENST00000562747 TRIM49BA6NDI0 452 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 PPP1R3GB7ZBB8 358 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 GOLGA6L22H0YM25 854 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 BIN1O00499 593 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 PCSK1P29120 753 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 TNNC1P63316 161 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 DUSP4Q13115 394 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 PLD1Q13393 1074 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 WDR72Q3MJ13 1102 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 SLC39A12Q504Y0 691 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 SV2AQ7L0J3 742 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 ELMOD1Q8N336 334 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 SPPL2BQ8TCT7 592 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 MMS19Q96T76 1030 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 KXD1Q9BQD3 176 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 DDX23Q9BUQ8 820 aaKnown RBP17.73■□□□□ 0.43
CDT1-202ENST00000562747 CLSTN2Q9H4D0 955 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 YIPF1Q9Y548 306 aa17.73■□□□□ 0.43
CDT1-202ENST00000562747 ZFP37Q9Y6Q3 630 aaPredicted RBP17.73■□□□□ 0.43
CDT1-202ENST00000562747 BICDL2A1A5D9 508 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 TACC1O75410 805 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 VNN1O95497 513 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 PTPN2P17706 415 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 WARSP23381 471 aaKnown RBP17.72■□□□□ 0.43
CDT1-202ENST00000562747 GTF2H1P32780 548 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 TWF1Q12792 350 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 NFE2Q16621 373 aaPredicted RBP17.72■□□□□ 0.43
CDT1-202ENST00000562747 ZNF699Q32M78 642 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 INTS6LQ5JSJ4 861 aaKnown RBP17.72■□□□□ 0.43
CDT1-202ENST00000562747 POTEHQ6S545 545 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 LRRTM3Q86VH5 581 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 OSTM1Q86WC4 334 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 SUMF1Q8NBK3 374 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 ATAD1Q8NBU5 361 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 KBTBD7Q8WVZ9 684 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 EEF2KMTQ96G04 330 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 CRISPLD1Q9H336 500 aa17.72■□□□□ 0.43
CDT1-202ENST00000562747 AVENQ9NQS1 362 aaPredicted RBP17.72■□□□□ 0.43
CDT1-202ENST00000562747 DNMT3BQ9UBC3 853 aaKnown RBP17.72■□□□□ 0.43
CDT1-202ENST00000562747 CEP250Q9BV73 2442 aa17.71■□□□□ 0.43
CDT1-202ENST00000562747 GPR179Q6PRD1 2367 aa17.71■□□□□ 0.43
CDT1-202ENST00000562747 KANSL1LA0AUZ9 987 aa17.71■□□□□ 0.43
CDT1-202ENST00000562747 STX10O60499 249 aa17.71■□□□□ 0.43
CDT1-202ENST00000562747 TRIM49P0CI25 452 aa17.71■□□□□ 0.43
CDT1-202ENST00000562747 TRIM49CP0CI26 452 aa17.71■□□□□ 0.43
CDT1-202ENST00000562747 ALDH1A3P47895 512 aa17.71■□□□□ 0.43
CDT1-202ENST00000562747 TUFMP49411 452 aaKnown RBP17.71■□□□□ 0.43
CDT1-202ENST00000562747 MLF2Q15773 248 aaPredicted RBP17.71■□□□□ 0.43
CDT1-202ENST00000562747 SGSM1Q2NKQ1 1148 aa17.71■□□□□ 0.43
CDT1-202ENST00000562747 PABPC1LQ4VXU2 614 aaKnown RBP17.71■□□□□ 0.43
CDT1-202ENST00000562747 ZNF667Q5HYK9 610 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms