RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 MAPK8IP2Q13387 824 aaPredicted RBP23.95■■□□□ 1.42
SYNGR3-202ENST00000562045 MTF1Q14872 753 aa23.95■■□□□ 1.42
SYNGR3-202ENST00000562045 ZNF667Q5HYK9 610 aa23.95■■□□□ 1.42
SYNGR3-202ENST00000562045 GPIHBP1Q8IV16 184 aa23.95■■□□□ 1.42
SYNGR3-202ENST00000562045 FAM71AQ8IYT1 594 aa23.95■■□□□ 1.42
SYNGR3-202ENST00000562045 C5orf42Q9H799 3197 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 PLEKP08567 350 aaPredicted RBP23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 PNPLA4P41247 253 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 MYO1EQ12965 1108 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 KCNC3Q14003 757 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 WSCD1Q658N2 575 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 SMYD5Q6GMV2 418 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 LLGL2Q6P1M3 1020 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 ARID3AQ99856 593 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 MTRRQ9UBK8 725 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 L1RE1Q9UN81 338 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 SNX9Q9Y5X1 595 aa23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 EPN1Q9Y6I3 576 aaPredicted RBP23.94■■□□□ 1.42
SYNGR3-202ENST00000562045 TBC1D4O60343 1298 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 NDUFA10O95299 355 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 P4HA1P13674 534 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 EIF4A3P38919 411 aaKnown RBP23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 USP8P40818 1118 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 DLX2Q07687 328 aaPredicted RBP23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 WDR72Q3MJ13 1102 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 HAUS4Q9H6D7 363 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 EPCAMP16422 314 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 BMS1Q14692 1282 aaKnown RBP23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 COL19A1Q14993 1142 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 TOGARAM2Q6ZUX3 1019 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 RTP3Q9BQQ7 232 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 GDAP2Q9NXN4 497 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 POLIQ9UNA4 740 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 HCFC2Q9Y5Z7 792 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 CDY1Q9Y6F8 540 aa23.93■■□□□ 1.42
SYNGR3-202ENST00000562045 HCRTO43612 131 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 IPO7O95373 1038 aaKnown RBP23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 ODC1P11926 461 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 KLRC2P26717 231 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 ANXA13P27216 316 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 LTBRP36941 435 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 ASPAP45381 313 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 PTK2Q05397 1052 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 ADAM15Q13444 863 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 SKIV2LQ15477 1246 aaKnown RBP23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 SOWAHAQ2M3V2 549 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 CTC1Q2NKJ3 1217 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 ANKS3Q6ZW76 656 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 PALB2Q86YC2 1186 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 APPL2Q8NEU8 664 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 FEZF2Q8TBJ5 459 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 SLC22A17Q8WUG5 538 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 TMEM209Q96SK2 561 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 EMILIN2Q9BXX0 1053 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 FNIP2Q9P278 1114 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 NXF1Q9UBU9 619 aaKnown RBP23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 SSX2IPQ9Y2D8 614 aa23.92■■□□□ 1.42
SYNGR3-202ENST00000562045 CCP110O43303 1012 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 AKR1B10O60218 316 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 OAZ2O95190 189 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 CYP11A1P05108 521 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 CCDC175P0C221 793 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 SPATA31D3P0C874 917 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 KRT5P13647 590 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 TYMPP19971 482 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 OR1D2P34982 312 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 CLCN4P51793 760 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 CDR1P51861 262 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 KIF11P52732 1056 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 YWHAEP62258 255 aaKnown RBP23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 YWHAHQ04917 246 aaPredicted RBP23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 OVOS1Q6IE37 1185 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 SPATA31D4Q6ZUB0 917 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 VPS36Q86VN1 386 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 GPR65Q8IYL9 337 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 PDCL2Q8N4E4 241 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 EFHBQ8N7U6 833 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 KCND1Q9NSA2 647 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 CLDND1Q9NY35 253 aa23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 MTCL1Q9Y4B5 1905 aaKnown RBP23.91■■□□□ 1.42
SYNGR3-202ENST00000562045 EIF3CLB5ME19 914 aaKnown RBP23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 ZSCAN12O43309 604 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 TBX10O75333 385 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 OR4Q2P0C623 313 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 ACO1P21399 889 aaKnown RBP23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 ASTE1Q2TB18 679 aaPredicted RBP23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 CTXN3Q4LDR2 81 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 LIMS2Q7Z4I7 341 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 OSTM1Q86WC4 334 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 EIF3CQ99613 913 aaKnown RBP23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 DESI2Q9BSY9 194 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 BCO2Q9BYV7 579 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 BARX2Q9UMQ3 279 aaPredicted RBP23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 BACE2Q9Y5Z0 518 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 ADGRG1Q9Y653 693 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 NDUFV1P49821 464 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 TNNC1P63316 161 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 EP400NLQ6ZTU2 488 aa23.9■■□□□ 1.42
SYNGR3-202ENST00000562045 OR10T2Q8NGX3 314 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms