RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 GALR2O43603 387 aaPredicted RBP19.29■□□□□ 0.68
FANCA-206ENST00000561660 C4BPAP04003 597 aaKnown RBP19.29■□□□□ 0.68
FANCA-206ENST00000561660 HMGA1P17096 107 aaKnown RBP19.29■□□□□ 0.68
FANCA-206ENST00000561660 WARSP23381 471 aaKnown RBP19.29■□□□□ 0.68
FANCA-206ENST00000561660 GABRR2P28476 465 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 PNOCQ13519 176 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 GRM2Q14416 872 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 SLC44A4Q53GD3 710 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 C1orf220Q5T0J3 134 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 ITIH5Q86UX2 942 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 ELMO3Q96BJ8 720 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 PRRX2Q99811 253 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 ATXN3LQ9H3M9 355 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 CRTAC1Q9NQ79 661 aa19.29■□□□□ 0.68
FANCA-206ENST00000561660 SHISA7A6NL88 538 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 VNN1O95497 513 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 STAU1O95793 577 aaKnown RBP19.28■□□□□ 0.68
FANCA-206ENST00000561660 PDGFRBP09619 1106 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 PCSK1P29120 753 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 NUBP1P53384 320 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 PTPN5P54829 565 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 STARD6P59095 220 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 PSMC1P62191 440 aaKnown RBP19.28■□□□□ 0.68
FANCA-206ENST00000561660 DDR2Q16832 855 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 WDR72Q3MJ13 1102 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 PHLDB3Q6NSJ2 640 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 VITQ6UXI7 678 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 TMEM150AQ86TG1 271 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 GPIHBP1Q8IV16 184 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 SMYD4Q8IYR2 804 aaPredicted RBP19.28■□□□□ 0.68
FANCA-206ENST00000561660 GUF1Q8N442 669 aaKnown RBP19.28■□□□□ 0.68
FANCA-206ENST00000561660 FAM200AQ8TCP9 573 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 MMS19Q96T76 1030 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 PHOX2BQ99453 314 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 SYT15Q9BQS2 421 aa19.28■□□□□ 0.68
FANCA-206ENST00000561660 USP34Q70CQ2 3546 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 CALUO43852 315 aaPredicted RBP19.27■□□□□ 0.68
FANCA-206ENST00000561660 TACC1O75410 805 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 CYP4F8P98187 520 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 VEPH1Q14D04 833 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 NFIL3Q16649 462 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 ZCWPW2Q504Y3 356 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 ERCC4Q92889 916 aaPredicted RBP19.27■□□□□ 0.68
FANCA-206ENST00000561660 CCDC47Q96A33 483 aaKnown RBP19.27■□□□□ 0.68
FANCA-206ENST00000561660 LRRC3BQ96PB8 259 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 DDX23Q9BUQ8 820 aaKnown RBP19.27■□□□□ 0.68
FANCA-206ENST00000561660 FOXQ1Q9C009 403 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 GPR88Q9GZN0 384 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 SLITRK6Q9H5Y7 841 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 ABCB6Q9NP58 842 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 CDH9Q9ULB4 789 aa19.27■□□□□ 0.68
FANCA-206ENST00000561660 HEPACAM2A8MVW5 462 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 STK25O00506 426 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 AKAP3O75969 853 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 F11P03951 625 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 PFKPQ01813 784 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 TRPC3Q13507 836 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 MLF2Q15773 248 aaPredicted RBP19.26■□□□□ 0.67
FANCA-206ENST00000561660 CFAP221Q4G0U5 840 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 GPR158Q5T848 1215 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 CEP135Q66GS9 1140 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 ARID3BQ8IVW6 561 aaPredicted RBP19.26■□□□□ 0.67
FANCA-206ENST00000561660 TMC2Q8TDI7 906 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 VRTNQ9H8Y1 702 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 DLGAP2Q9P1A6 1054 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 NXF1Q9UBU9 619 aaKnown RBP19.26■□□□□ 0.67
FANCA-206ENST00000561660 MTF2Q9Y483 593 aaPredicted RBP19.26■□□□□ 0.67
FANCA-206ENST00000561660 VPS13AQ96RL7 3174 aa19.26■□□□□ 0.67
FANCA-206ENST00000561660 GOLGA6L4A6NEF3 574 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 H0Y858 1186 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 PHACTR2O75167 634 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 LRRN2O75325 713 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 KIF20AO95235 890 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 FGF19O95750 216 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 DCNP07585 359 aaKnown RBP19.25■□□□□ 0.67
FANCA-206ENST00000561660 FAM163BP0C2L3 166 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 GLULP15104 373 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 PSMC3P17980 439 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 NR2F2P24468 414 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 HOXD11P31277 338 aaPredicted RBP19.25■□□□□ 0.67
FANCA-206ENST00000561660 ATICP31939 592 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 GNL1P36915 607 aaPredicted RBP19.25■□□□□ 0.67
FANCA-206ENST00000561660 AP3M2P53677 418 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 FAM160A1Q05DH4 1040 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 BIRC3Q13489 604 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 NCOA4Q13772 614 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 ZACNQ401N2 412 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 SPATA2LQ8IUW3 424 aaPredicted RBP19.25■□□□□ 0.67
FANCA-206ENST00000561660 MFSD6LQ8IWD5 586 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 CCDC105Q8IYK2 499 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 SPATA20Q8TB22 786 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 MYLPFQ96A32 169 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 FUBP3Q96I24 572 aaKnown RBP eCLIP19.25■□□□□ 0.67
FANCA-206ENST00000561660 TRMT61BQ9BVS5 477 aaKnown RBP19.25■□□□□ 0.67
FANCA-206ENST00000561660 SLC46A2Q9BY10 475 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 DPEP3Q9H4B8 488 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 SMYD3Q9H7B4 428 aa19.25■□□□□ 0.67
FANCA-206ENST00000561660 F5P12259 2224 aa19.24■□□□□ 0.67
FANCA-206ENST00000561660 ARNTLO00327 626 aa19.24■□□□□ 0.67
FANCA-206ENST00000561660 MAPK13O15264 365 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms