RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CTCFLQ8NI51 663 aaPredicted RBP5.89□□□□□ -1.47
HERC1-213ENST00000561359 RSPRY1Q96DX4 576 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 CAMK1GQ96NX5 476 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 NACC1Q96RE7 527 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 SH2D3AQ9BRG2 576 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 PAAF1Q9BRP4 392 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 EIF2AQ9BY44 585 aaKnown RBP5.89□□□□□ -1.47
HERC1-213ENST00000561359 ANO3Q9BYT9 981 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 TPSD1Q9BZJ3 242 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 TRIM6Q9C030 488 aaPredicted RBP5.89□□□□□ -1.47
HERC1-213ENST00000561359 IFT122Q9HBG6 1241 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 FSCN3Q9NQT6 498 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 DISC1Q9NRI5 854 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 FAM13BQ9NYF5 915 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 EBF1Q9UH73 591 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 APOBEC2Q9Y235 224 aaKnown RBP5.89□□□□□ -1.47
HERC1-213ENST00000561359 GIT1Q9Y2X7 761 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 DOPEY1Q5JWR5 2465 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 ARHGEF37A1IGU5 675 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 TRABD2BA6NFA1 517 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 FAM86B1E9PN63 330 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 SH3BP5O60239 455 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 KIF4AO95239 1232 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 WISP1O95388 367 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 FURINP09958 794 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 FAM86B2P0C5J1 330 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 AKAP5P24588 427 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 ITPKBP27987 946 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 SREBF1P36956 1147 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 GNAQP50148 359 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 GFPT1Q06210 699 aaPredicted RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 TNK2Q07912 1038 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 NCBP1Q09161 790 aaKnown RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 FCHO2Q0JRZ9 810 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 DMC1Q14565 340 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 PTPAQ15257 358 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 TEAD2Q15562 447 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 TARBP2Q15633 366 aaKnown RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 UGCGQ16739 394 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 ITPRIPL2Q3MIP1 535 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 ARHGAP29Q52LW3 1261 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 TAF1BQ53T94 588 aaPredicted RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 FSTL4Q6MZW2 842 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 NOTUMQ6P988 496 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 ARMCX6Q7L4S7 300 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 LPCAT2Q7L5N7 544 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 SRGAP1Q7Z6B7 1085 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 SYT12Q8IV01 421 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 DMRTC2Q8IXT2 367 aaPredicted RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 MINDY1Q8N5J2 469 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 FAM181AQ8N9Y4 354 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 RPLP0P6Q8NHW5 317 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 ZNF512Q96ME7 567 aaPredicted RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 FCRL3Q96P31 734 aaPredicted RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 LZTS2Q9BRK4 669 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 GPR88Q9GZN0 384 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 NXF3Q9H4D5 531 aaKnown RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 PRORYQ9H606 182 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 MINDY3Q9H8M7 445 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 CYP4F11Q9HBI6 524 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 ASAH2Q9NR71 780 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 MTRRQ9UBK8 725 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 PARP2Q9UGN5 583 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 NAGPAQ9UK23 515 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 COL4A3BPQ9Y5P4 624 aa5.88□□□□□ -1.47
HERC1-213ENST00000561359 UBR5O95071 2799 aaPredicted RBP5.88□□□□□ -1.47
HERC1-213ENST00000561359 ATG2BQ96BY7 2078 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 IGKV6-21A0A0C4DH24 114 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 TMEM150BA6NC51 233 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 K7ELQ4 463 aaPredicted RBP5.87□□□□□ -1.47
HERC1-213ENST00000561359 TNFRSF10BO14763 440 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 CHMP2AO43633 222 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 MOSPD3O75425 235 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 PLEKHA8P1O95397 391 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 EGFP01133 1207 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 CENPBP07199 599 aaPredicted RBP5.87□□□□□ -1.47
HERC1-213ENST00000561359 CD59P13987 128 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 SMARCA1P28370 1054 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 ADCY7P51828 1080 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 NAPAP54920 295 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 ARPP19P56211 112 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 GPLD1P80108 840 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 PLAURQ03405 335 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 PSMD2Q13200 908 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 TUSC3Q13454 348 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 TMEM196Q5HYL7 178 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 PERM1Q5SV97 790 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 SLC23A3Q6PIS1 610 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 TOGARAM2Q6ZUX3 1019 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 SYT13Q7L8C5 426 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 TTC30AQ86WT1 665 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 MARCH9Q86YJ5 346 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 ARID3BQ8IVW6 561 aaPredicted RBP5.87□□□□□ -1.47
HERC1-213ENST00000561359 SRBD1Q8N5C6 995 aaKnown RBP5.87□□□□□ -1.47
HERC1-213ENST00000561359 LEMD2Q8NC56 503 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 GSTCDQ8NEC7 633 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 TSTD1Q8NFU3 115 aa5.87□□□□□ -1.47
HERC1-213ENST00000561359 OR2I1PQ8NGU4 316 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms