RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 MSANTD4Q8NCY6 345 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 MYCBPAPQ8TBZ2 947 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 PLEKHO2Q8TD55 490 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 SLC22A17Q8WUG5 538 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 GOLGA1Q92805 767 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 JAKMIP2Q96AA8 810 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 BORCS6Q96GS4 357 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CORO1BQ9BR76 489 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 MRPL45Q9BRJ2 306 aaKnown RBP11.4□□□□□ -0.58
TPM1-229ENST00000561242 VN1R3Q9BXE9 311 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 PRKD2Q9BZL6 878 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 NACA2Q9H009 215 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 SMYD3Q9H7B4 428 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 ABCB6Q9NP58 842 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CISHQ9NSE2 258 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 MRPS23Q9Y3D9 190 aaKnown RBP11.4□□□□□ -0.58
TPM1-229ENST00000561242 MYH11P35749 1972 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 WDR27A2RRH5 827 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 GABRDO14764 452 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 LINC01565O15544 149 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 ABLIM3O94929 683 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 VNN1O95497 513 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 ABL1P00519 1130 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 FAM200BP0CF97 657 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 MYL4P12829 197 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 FSHRP23945 695 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 KRT9P35527 623 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 RAP1GAPP47736 663 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 PDE6CP51160 858 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 COPB1P53618 953 aaKnown RBP11.39□□□□□ -0.59
TPM1-229ENST00000561242 UBASH3AP57075 661 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 TMEM270Q6UE05 265 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 CD300LGQ6UXG3 332 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.39□□□□□ -0.59
TPM1-229ENST00000561242 C12orf76Q8N812 135 aaPredicted RBP11.39□□□□□ -0.59
TPM1-229ENST00000561242 ATAD1Q8NBU5 361 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 STKLD1Q8NE28 680 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 CMASQ8NFW8 434 aaPredicted RBP11.39□□□□□ -0.59
TPM1-229ENST00000561242 ANP32BQ92688 251 aaKnown RBP11.39□□□□□ -0.59
TPM1-229ENST00000561242 CYFIP2Q96F07 1278 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 SMARCD1Q96GM5 515 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 NOX5Q96PH1 765 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 ASB2Q96Q27 587 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 LSM14BQ9BX40 385 aaKnown RBP11.39□□□□□ -0.59
TPM1-229ENST00000561242 GPR88Q9GZN0 384 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 XYLT2Q9H1B5 865 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.39□□□□□ -0.59
TPM1-229ENST00000561242 FBXW11Q9UKB1 542 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 COQ4Q9Y3A0 265 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 INSL5Q9Y5Q6 135 aa11.39□□□□□ -0.59
TPM1-229ENST00000561242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.38□□□□□ -0.59
TPM1-229ENST00000561242 MTMR11A4FU01 709 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 AP1G2O75843 785 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 RTN3O95197 1032 aaPredicted RBP11.38□□□□□ -0.59
TPM1-229ENST00000561242 VDRP11473 427 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 BDNFP23560 247 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 LMO2P25791 158 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 ADORA2BP29275 332 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 CDC25CP30307 473 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 GCNT1Q02742 428 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 CBX2Q14781 532 aaPredicted RBP11.38□□□□□ -0.59
TPM1-229ENST00000561242 KRT31Q15323 416 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 TJAP1Q5JTD0 557 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 LILRA6Q6PI73 481 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 GPR149Q86SP6 731 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 TADA2BQ86TJ2 420 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 TDRD5Q8NAT2 981 aaKnown RBP11.38□□□□□ -0.59
TPM1-229ENST00000561242 GIPC2Q8TF65 315 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 MRPS31Q92665 395 aaKnown RBP11.38□□□□□ -0.59
TPM1-229ENST00000561242 TATDN2Q93075 761 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 MYLPFQ96A32 169 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 IQCDQ96DY2 449 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 FAM84AQ96KN4 292 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 RPGRIP1Q96KN7 1286 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 CEP295NLQ96MC4 621 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 SLITRK1Q96PX8 696 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 NUP58Q9BVL2 599 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 FBXO44Q9H4M3 255 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 SYNCQ9H7C4 482 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 CBX8Q9HC52 389 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 APEX2Q9UBZ4 518 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 LIMA1Q9UHB6 759 aaKnown RBP11.38□□□□□ -0.59
TPM1-229ENST00000561242 ZMYM5Q9UJ78 669 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 DNAJC12Q9UKB3 198 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 ZFP37Q9Y6Q3 630 aaPredicted RBP11.38□□□□□ -0.59
TPM1-229ENST00000561242 TCHHQ07283 1943 aa11.38□□□□□ -0.59
TPM1-229ENST00000561242 SIP14410 1827 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 MYBPHLA2RUH7 354 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 ADAM12O43184 909 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 PAEPP09466 180 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 HAPLN1P10915 354 aaPredicted RBP11.37□□□□□ -0.59
TPM1-229ENST00000561242 DESP17661 470 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 STAT1P42224 750 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 PPP3CCP48454 512 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 IFRD2Q12894 506 aaPredicted RBP11.37□□□□□ -0.59
TPM1-229ENST00000561242 CTC1Q2NKJ3 1217 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 C1orf220Q5T0J3 134 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms