RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 C2orf15Q8WU43 125 aaKnown RBP17.15■□□□□ 0.34
LMX1B-204ENST00000561065 DEPDC1BQ8WUY9 529 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 KBTBD7Q8WVZ9 684 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 ANKRD36BP1Q96IX9 119 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 TRMT61BQ9BVS5 477 aaKnown RBP17.15■□□□□ 0.34
LMX1B-204ENST00000561065 ATXN3LQ9H3M9 355 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 BRD9Q9H8M2 597 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 NME7Q9Y5B8 376 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 FAM186AA6NE01 2351 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 FRYLO94915 3013 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 A0A1B0GVL5 298 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 GABRDO14764 452 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 HUS1O60921 280 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 HMGA1P17096 107 aaKnown RBP17.14■□□□□ 0.33
LMX1B-204ENST00000561065 TUFMP49411 452 aaKnown RBP17.14■□□□□ 0.33
LMX1B-204ENST00000561065 RBP5P82980 135 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 TSPY1Q01534 308 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 CYP24A1Q07973 514 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 FZD5Q13467 585 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 GPR158Q5T848 1215 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 SDHAF4Q5VUM1 108 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 ITIH5Q86UX2 942 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 ARID3BQ8IVW6 561 aaPredicted RBP17.14■□□□□ 0.33
LMX1B-204ENST00000561065 C1orf210Q8IVY1 113 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 MFSD6LQ8IWD5 586 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 DCP1BQ8IZD4 617 aaKnown RBP17.14■□□□□ 0.33
LMX1B-204ENST00000561065 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 TOP6BLQ8N6T0 577 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 RDH13Q8NBN7 331 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 FAM200AQ8TCP9 573 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 PLEKHO2Q8TD55 490 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 PI4K2AQ9BTU6 479 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 HOOK1Q9UJC3 728 aaKnown RBP17.14■□□□□ 0.33
LMX1B-204ENST00000561065 HPSEQ9Y251 543 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 PCDHB5Q9Y5E4 795 aa17.14■□□□□ 0.33
LMX1B-204ENST00000561065 RIF1Q5UIP0 2472 aaKnown RBP17.14■□□□□ 0.33
LMX1B-204ENST00000561065 HELZP42694 1942 aaKnown RBP17.13■□□□□ 0.33
LMX1B-204ENST00000561065 WDR87Q6ZQQ6 2873 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 FAM170BA6NMN3 283 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 TADA3O75528 432 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 FCHO2Q0JRZ9 810 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 VEPH1Q14D04 833 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 PSMD6Q15008 389 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 C12orf56Q8IXR9 622 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 PAGE5Q96GU1 130 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 HPDLQ96IR7 371 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 CGRRF1Q99675 332 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 OSBPL6Q9BZF3 934 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 GPR88Q9GZN0 384 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 EXOC1Q9NV70 894 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 GTF3C4Q9UKN8 822 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 CIZ1Q9ULV3 898 aaPredicted RBP17.13■□□□□ 0.33
LMX1B-204ENST00000561065 R4GN57 208 aa17.13■□□□□ 0.33
LMX1B-204ENST00000561065 MYBPHLA2RUH7 354 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 ATP2C2O75185 946 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 TNNC2P02585 160 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 DLATP10515 647 aaKnown RBP17.12■□□□□ 0.33
LMX1B-204ENST00000561065 CYP2F1P24903 491 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
LMX1B-204ENST00000561065 PSMC1P62191 440 aaKnown RBP17.12■□□□□ 0.33
LMX1B-204ENST00000561065 STK4Q13043 487 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 DUOXA2Q1HG44 320 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 TRAPPC11Q7Z392 1133 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 FSIP1Q8NA03 581 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 XXYLT1Q8NBI6 393 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 RIN3Q8TB24 985 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 SPATA18Q8TC71 538 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 ZNF516Q92618 1163 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 IRF7Q92985 503 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 CLDN23Q96B33 292 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 SMG9Q9H0W8 520 aaKnown RBP17.12■□□□□ 0.33
LMX1B-204ENST00000561065 TRPV5Q9NQA5 729 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 PIAS3Q9Y6X2 628 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 GVINP1Q7Z2Y8 2422 aa17.12■□□□□ 0.33
LMX1B-204ENST00000561065 FAM237AA0A1B0GTK4 181 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 PRPF40AO75400 957 aaKnown RBP17.11■□□□□ 0.33
LMX1B-204ENST00000561065 CST3P01034 146 aaPredicted RBP17.11■□□□□ 0.33
LMX1B-204ENST00000561065 F11P03951 625 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 SP9P0CG40 484 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 LMO2P25791 158 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 CDC25CP30307 473 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 SOX9P48436 509 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 CASP4P49662 377 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 NLRP12P59046 1061 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 MYL7Q01449 175 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 NFE2Q16621 373 aaPredicted RBP17.11■□□□□ 0.33
LMX1B-204ENST00000561065 DDR2Q16832 855 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 KNOP1Q1ED39 458 aaKnown RBP17.11■□□□□ 0.33
LMX1B-204ENST00000561065 KMT5BQ4FZB7 885 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 WDR44Q5JSH3 913 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 ZNF852Q6ZMS4 543 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 CCDC127Q96BQ5 260 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 ZFYVE19Q96K21 471 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 BCO2Q9BYV7 579 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 GTPBP4Q9BZE4 634 aaKnown RBP17.11■□□□□ 0.33
LMX1B-204ENST00000561065 TASP1Q9H6P5 420 aa17.11■□□□□ 0.33
LMX1B-204ENST00000561065 ABCB6Q9NP58 842 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms