RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 GZF1Q9H116 711 aaPredicted RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 DNAJC25Q9H1X3 360 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 ATXN3LQ9H3M9 355 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 AVENQ9NQS1 362 aaPredicted RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.191e-12■■■■■ 31.2
CTDSPL2-209ENST00000560620 CDH9Q9ULB4 789 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 MAGED2Q9UNF1 606 aaPredicted RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 NOTCH4Q99466 2003 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 TECTAO75443 2155 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 MYBPHLA2RUH7 354 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 A8MXQ7 604 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 PSMA7O14818 248 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 MAPK13O15264 365 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 ATP2C2O75185 946 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 FGF19O95750 216 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 PDGFBP01127 241 aaPredicted RBP13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 C4BPAP04003 597 aaKnown RBP13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 SRFP11831 508 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 ATF6P18850 670 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 WARSP23381 471 aaKnown RBP13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 CYP2F1P24903 491 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 GABRR2P28476 465 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 GCLMP48507 274 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 RPL10AP62906 217 aaKnown RBP13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 CLDN10P78369 228 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 NFIL3Q16649 462 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 DDR2Q16832 855 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 SGSM1Q2NKQ1 1148 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 ARHGAP15Q53QZ3 475 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 TCERG1LQ5VWI1 586 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 KLHL10Q6JEL2 608 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 C4orf50Q6ZRC1 276 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 SV2AQ7L0J3 742 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 BMP8AQ7Z5Y6 402 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 SIX5Q8N196 739 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 MRPL45Q9BRJ2 306 aaKnown RBP13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 ZFP14Q9HCL3 533 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 MAGEC2Q9UBF1 373 aaPredicted RBP13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 CA14Q9ULX7 337 aa13.87□□□□□ -0.19
CTDSPL2-209ENST00000560620 TACC1O75410 805 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 MICAL2O94851 1124 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 VNN1O95497 513 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 STAU1O95793 577 aaKnown RBP13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 RAP1GAPP47736 663 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 GPR15P49685 360 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 GPC5P78333 572 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 CAMK4Q16566 473 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 CCDC142Q17RM4 750 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 ZACNQ401N2 412 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 ZCWPW2Q504Y3 356 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 DCAF17Q5H9S7 520 aaPredicted RBP13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 MDH1BQ5I0G3 518 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 FAM78AQ5JUQ0 283 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 SDHAF4Q5VUM1 108 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 ANKRD40Q6AI12 368 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 ELOA2Q8IYF1 753 aaPredicted RBP13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 ADSSL1Q8N142 457 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 CCDC150Q8NCX0 1101 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 STKLD1Q8NE28 680 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 SPATA20Q8TB22 786 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 SHKBP1Q8TBC3 707 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 ZSCAN18Q8TBC5 510 aaPredicted RBP13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 GPR88Q9GZN0 384 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 XYLT2Q9H1B5 865 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 SMYD3Q9H7B4 428 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 ZNF334Q9HCZ1 680 aaPredicted RBP13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 ABCB6Q9NP58 842 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 MAN1B1Q9UKM7 699 aa13.86□□□□□ -0.19
CTDSPL2-209ENST00000560620 TRIM49BA6NDI0 452 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 DPYSL4O14531 572 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 STX10O60499 249 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 HLA-DRAP01903 254 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 CSH1P0DML2 217 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 CSH2P0DML3 217 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 BDNFP23560 247 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 ANXA13P27216 316 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 CDC25CP30307 473 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 GRIK1P39086 918 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 PPP1R2P41236 205 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 EPHA5P54756 1037 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 CDH8P55286 799 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 FKBP3Q00688 224 aaKnown RBP13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 GRM2Q14416 872 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 COBLL1Q53SF7 1204 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 GPR158Q5T848 1215 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 TANGO2Q6ICL3 276 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 LIMS2Q7Z4I7 341 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 TMC8Q8IU68 726 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 GPIHBP1Q8IV16 184 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 SMARCD2Q92925 531 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 MYLPFQ96A32 169 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 FUBP3Q96I24 572 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 ZSWIM3Q96MP5 696 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 ASB16Q96NS5 453 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 MKNK1Q9BUB5 465 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 WNT16Q9UBV4 365 aa13.85□□□□□ -0.19
CTDSPL2-209ENST00000560620 NRG2O14511 850 aaPredicted RBP13.84□□□□□ -0.19
CTDSPL2-209ENST00000560620 MOSPD3O75425 235 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms