RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 FSIP1Q8NA03 581 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 FAM3CQ92520 227 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 PLA2G2FQ9BZM2 168 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 CRISPLD1Q9H336 500 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 EXOC1Q9NV70 894 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 RCOR1Q9UKL0 485 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 PCDHA7Q9UN72 937 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 L1RE1Q9UN81 338 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 PCDHGA2Q9Y5H1 932 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 PIAS3Q9Y6X2 628 aa15.11■□□□□ 0.01
TPM1-223ENST00000560445 SP9P0CG40 484 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 GJA1P17302 382 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 VIPR2P41587 438 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 MAGEA11P43364 429 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 TNNC1P63316 161 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 TRPC3Q13507 836 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 PSMD6Q15008 389 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 KNOP1Q1ED39 458 aaKnown RBP15.1■□□□□ 0.01
TPM1-223ENST00000560445 FOXD4L6Q3SYB3 417 aaPredicted RBP15.1■□□□□ 0.01
TPM1-223ENST00000560445 FOXD4L3Q6VB84 417 aaPredicted RBP15.1■□□□□ 0.01
TPM1-223ENST00000560445 MAMSTRQ6ZN01 415 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 ARID3BQ8IVW6 561 aaPredicted RBP15.1■□□□□ 0.01
TPM1-223ENST00000560445 BPIFB1Q8TDL5 484 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 ATRIPQ8WXE1 791 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 SECISBP2LQ93073 1101 aaKnown RBP15.1■□□□□ 0.01
TPM1-223ENST00000560445 TRMT2BQ96GJ1 504 aaKnown RBP15.1■□□□□ 0.01
TPM1-223ENST00000560445 ZSWIM3Q96MP5 696 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 TMEM209Q96SK2 561 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 IKZF4Q9H2S9 585 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 CDH9Q9ULB4 789 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 F5P12259 2224 aa15.1■□□□□ 0.01
TPM1-223ENST00000560445 EXOC3O60645 756 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 DLATP10515 647 aaKnown RBP15.09■□□□□ 0.01
TPM1-223ENST00000560445 ATF6P18850 670 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 TARSP26639 723 aaKnown RBP15.09■□□□□ 0.01
TPM1-223ENST00000560445 ANXA13P27216 316 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 CYP2J2P51589 502 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 CCR3P51677 355 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 DNM1Q05193 864 aaKnown RBP15.09■□□□□ 0.01
TPM1-223ENST00000560445 CC2D1AQ6P1N0 951 aaPredicted RBP15.09■□□□□ 0.01
TPM1-223ENST00000560445 VSTM1Q6UX27 236 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 GAREM2Q75VX8 874 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 RALGPS2Q86X27 583 aaPredicted RBP15.09■□□□□ 0.01
TPM1-223ENST00000560445 CBWD2Q8IUF1 395 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 TTC9BQ8N6N2 239 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 SYAP1Q96A49 352 aaPredicted RBP15.09■□□□□ 0.01
TPM1-223ENST00000560445 SPATA32Q96LK8 384 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 CGRRF1Q99675 332 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 LPIN3Q9BQK8 851 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 FGFBP2Q9BYJ0 223 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 DNAI2Q9GZS0 605 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 SCAND2PQ9GZW5 306 aaPredicted RBP15.09■□□□□ 0.01
TPM1-223ENST00000560445 SNX25Q9H3E2 840 aa15.09■□□□□ 0.01
TPM1-223ENST00000560445 GABRDO14764 452 aa15.08■□□□□ 0
TPM1-223ENST00000560445 PHACTR2O75167 634 aa15.08■□□□□ 0
TPM1-223ENST00000560445 SOAT2O75908 522 aa15.08■□□□□ 0
TPM1-223ENST00000560445 STAU1O95793 577 aaKnown RBP15.08■□□□□ 0
TPM1-223ENST00000560445 PFKLP17858 780 aa15.08■□□□□ 0
TPM1-223ENST00000560445 CMA1P23946 247 aa15.08■□□□□ 0
TPM1-223ENST00000560445 ATICP31939 592 aa15.08■□□□□ 0
TPM1-223ENST00000560445 AFMP43652 599 aa15.08■□□□□ 0
TPM1-223ENST00000560445 NLRP12P59046 1061 aa15.08■□□□□ 0
TPM1-223ENST00000560445 EHHADHQ08426 723 aa15.08■□□□□ 0
TPM1-223ENST00000560445 DGKKQ5KSL6 1271 aa15.08■□□□□ 0
TPM1-223ENST00000560445 ASCL5Q7RTU5 278 aa15.08■□□□□ 0
TPM1-223ENST00000560445 TRAPPC11Q7Z392 1133 aa15.08■□□□□ 0
TPM1-223ENST00000560445 CMTM8Q8IZV2 173 aa15.08■□□□□ 0
TPM1-223ENST00000560445 TMEM130Q8N3G9 435 aa15.08■□□□□ 0
TPM1-223ENST00000560445 GIPC2Q8TF65 315 aa15.08■□□□□ 0
TPM1-223ENST00000560445 SCFD1Q8WVM8 642 aa15.08■□□□□ 0
TPM1-223ENST00000560445 MMS19Q96T76 1030 aa15.08■□□□□ 0
TPM1-223ENST00000560445 SYT15Q9BQS2 421 aa15.08■□□□□ 0
TPM1-223ENST00000560445 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
TPM1-223ENST00000560445 CHRDQ9H2X0 955 aa15.08■□□□□ 0
TPM1-223ENST00000560445 ZSCAN32Q9NX65 697 aa15.08■□□□□ 0
TPM1-223ENST00000560445 MAGEC2Q9UBF1 373 aaPredicted RBP15.08■□□□□ 0
TPM1-223ENST00000560445 SIX4Q9UIU6 781 aa15.08■□□□□ 0
TPM1-223ENST00000560445 NDRG2Q9UN36 371 aaKnown RBP15.08■□□□□ 0
TPM1-223ENST00000560445 ATP8B3O60423 1300 aa15.08■□□□□ 0
TPM1-223ENST00000560445 PATJQ8NI35 1801 aa15.08■□□□□ 0
TPM1-223ENST00000560445 TICRRQ7Z2Z1 1910 aa15.07■□□□□ 0
TPM1-223ENST00000560445 TRIM66O15016 1216 aa15.07■□□□□ 0
TPM1-223ENST00000560445 TACC1O75410 805 aa15.07■□□□□ 0
TPM1-223ENST00000560445 NOL4O94818 638 aa15.07■□□□□ 0
TPM1-223ENST00000560445 CLSTN1O94985 981 aa15.07■□□□□ 0
TPM1-223ENST00000560445 P4HA1P13674 534 aa15.07■□□□□ 0
TPM1-223ENST00000560445 WARSP23381 471 aaKnown RBP15.07■□□□□ 0
TPM1-223ENST00000560445 PPP3CCP48454 512 aa15.07■□□□□ 0
TPM1-223ENST00000560445 CSTF1Q05048 431 aaKnown RBP15.07■□□□□ 0
TPM1-223ENST00000560445 CYP24A1Q07973 514 aa15.07■□□□□ 0
TPM1-223ENST00000560445 ZNF268Q14587 947 aaPredicted RBP15.07■□□□□ 0
TPM1-223ENST00000560445 SOWAHAQ2M3V2 549 aa15.07■□□□□ 0
TPM1-223ENST00000560445 LRRTM3Q86VH5 581 aa15.07■□□□□ 0
TPM1-223ENST00000560445 NELFCDQ8IXH7 590 aa15.07■□□□□ 0
TPM1-223ENST00000560445 ADSSL1Q8N142 457 aa15.07■□□□□ 0
TPM1-223ENST00000560445 SYNPOQ8N3V7 929 aa15.07■□□□□ 0
TPM1-223ENST00000560445 CXorf38Q8TB03 319 aa15.07■□□□□ 0
TPM1-223ENST00000560445 TMEM174Q8WUU8 243 aa15.07■□□□□ 0
TPM1-223ENST00000560445 HPS3Q969F9 1004 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms