RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 AMACRQ9UHK6 382 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 RAD51CO43502 376 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 MED7O43513 233 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 SASH3O75995 380 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 CD4P01730 458 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 THP07101 528 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 PFKMP08237 780 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 VDRP11473 427 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 RFC1P35251 1148 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 GNL1P36915 607 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 TAF6P49848 677 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 ZFYVE27Q5T4F4 411 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 TXNRD3NBQ6F5E7 133 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 RTN4RL1Q86UN2 441 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 TTC30AQ86WT1 665 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 RASGEF1CQ8N431 466 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 LRRC52Q8N7C0 313 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 FAM118BQ9BPY3 351 aa11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 METTL5Q9NRN9 209 aaKnown RBP11.51□□□□□ -0.57
SNRPA1-211ENST00000560433 MOXD2PA6NHM9 499 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 E5RJQ4 531 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 LSM8O95777 96 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CTNNA1P35221 906 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 PDCLQ13371 301 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 TAF5Q15542 800 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CNGA2Q16280 664 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 RAB6CQ53S08 254 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 WSCD1Q658N2 575 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 PMF1Q6P1K2 205 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 ANKS1BQ7Z6G8 1248 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 OSTM1Q86WC4 334 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 APPL2Q8NEU8 664 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 C18orf8Q96DM3 657 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 TRIM11Q96F44 468 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 HERPUD2Q9BSE4 406 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 HEMGNQ9BXL5 484 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 B3GNT5Q9BYG0 378 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 RAB6CQ9H0N0 254 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CARD9Q9H257 536 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 MRPL47Q9HD33 250 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 RAB21Q9UL25 225 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 PCDHA3Q9Y5H8 950 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 TCRBV5S1A1TA0A578 114 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 PI4K2BG5E9Z4 385 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CLDN5O00501 218 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CYB561D2O14569 222 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CABYRO75952 493 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 PROSCO94903 275 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 HEXIM1O94992 359 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 STAU1O95793 577 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 GNRH1P01148 92 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CALB1P05937 261 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CDH5P33151 784 aaPredicted RBP11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 GUCY2DQ02846 1103 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 RPAINQ86UA6 219 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 XYLT1Q86Y38 959 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 IFT81Q8WYA0 676 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 VCPIP1Q96JH7 1222 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 RNF208Q9H0X6 261 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 WNT8AQ9H1J5 351 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 EPB41L5Q9HCM4 733 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 CHST12Q9NRB3 414 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 RNF14Q9UBS8 474 aa11.5□□□□□ -0.57
SNRPA1-211ENST00000560433 TMEM191CA6NGB0 347 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 KBTBD13C9JR72 458 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 PQBP1O60828 265 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 HUS1O60921 280 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 KRT3P12035 628 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 SMTNL2Q2TAL5 461 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 SH3PXD2AQ5TCZ1 1133 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 DDX42Q86XP3 938 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 CCDC50Q8IVM0 306 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 SCUBE3Q8IX30 993 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 ZNF518BQ9C0D4 1074 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 MIS12Q9H081 205 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 LHX5Q9H2C1 402 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 SNX25Q9H3E2 840 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 RSAD1Q9HA92 442 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 ARFGAP3Q9NP61 516 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 SCINQ9Y6U3 715 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 TET1Q8NFU7 2136 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 A0A0U1RQF3 1178 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 CCDC151A5D8V7 595 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 MIF4GDA9UHW6 222 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 ARVCFO00192 962 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 PODXLO00592 558 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 XPOTO43592 962 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 ITGB1P05556 798 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 BRCC3P46736 316 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 RWDD2BP57060 319 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 PDE4CQ08493 712 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 KCNT1Q5JUK3 1230 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 BEND6Q5SZJ8 279 aaPredicted RBP11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 FAM102AQ5T9C2 384 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms