RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 MCRS1Q96EZ8 462 aa15.72■□□□□ 0.11
PSME1-207ENST00000560420 CCDC34Q96HJ3 373 aa15.72■□□□□ 0.11
PSME1-207ENST00000560420 FUBP3Q96I24 572 aaKnown RBP eCLIP15.72■□□□□ 0.11
PSME1-207ENST00000560420 SEPT5Q99719 369 aaPredicted RBP15.72■□□□□ 0.11
PSME1-207ENST00000560420 SYT15Q9BQS2 421 aa15.72■□□□□ 0.11
PSME1-207ENST00000560420 RMND1Q9NWS8 449 aa15.72■□□□□ 0.11
PSME1-207ENST00000560420 ABI2Q9NYB9 513 aaPredicted RBP15.72■□□□□ 0.11
PSME1-207ENST00000560420 GTF3C4Q9UKN8 822 aa15.72■□□□□ 0.11
PSME1-207ENST00000560420 CDH9Q9ULB4 789 aa15.72■□□□□ 0.11
PSME1-207ENST00000560420 PCDHB5Q9Y5E4 795 aa15.72■□□□□ 0.11
PSME1-207ENST00000560420 DENND4CQ5VZ89 1909 aa15.72■□□□□ 0.11
PSME1-207ENST00000560420 NUP210Q8TEM1 1887 aaPredicted RBP15.71■□□□□ 0.11
PSME1-207ENST00000560420 COL4A3Q01955 1670 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 GOLGA6L4A6NEF3 574 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 SHISA7A6NL88 538 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 ATP2C2O75185 946 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 MYL4P12829 197 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 BMP6P22004 513 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 WEE1P30291 646 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 AVPR2P30518 371 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 MAGEA11P43364 429 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 GPR15P49685 360 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 CDR1P51861 262 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 PMS1P54277 932 aaKnown RBP15.71■□□□□ 0.11
PSME1-207ENST00000560420 GPC5P78333 572 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 NCOA4Q13772 614 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 TANGO2Q6ICL3 276 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 SV2AQ7L0J3 742 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 ITIH5Q86UX2 942 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 TMEM105Q8N8V8 129 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 KXD1Q9BQD3 176 aa15.71■□□□□ 0.11
PSME1-207ENST00000560420 DDX23Q9BUQ8 820 aaKnown RBP15.71■□□□□ 0.11
PSME1-207ENST00000560420 GREB1Q4ZG55 1949 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 A0A1W2PRU2 124 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 TADA3O75528 432 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 NOL4O94818 638 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 FGF19O95750 216 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 ASS1P00966 412 aaKnown RBP15.7■□□□□ 0.1
PSME1-207ENST00000560420 CFHP08603 1231 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 CLCN5P51795 746 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 VAMP7P51809 220 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 PSMC1P62191 440 aaKnown RBP15.7■□□□□ 0.1
PSME1-207ENST00000560420 PPP3CAQ08209 521 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 WDR72Q3MJ13 1102 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 STXBP5Q5T5C0 1151 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 CEP135Q66GS9 1140 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 INTS8Q75QN2 995 aaKnown RBP15.7■□□□□ 0.1
PSME1-207ENST00000560420 SUGP1Q8IWZ8 645 aaKnown RBP15.7■□□□□ 0.1
PSME1-207ENST00000560420 ADSSL1Q8N142 457 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 SIX5Q8N196 739 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 PRSS33Q8NF86 280 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 SMARCD2Q92925 531 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 MYLPFQ96A32 169 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 RSPRY1Q96DX4 576 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 MYRFLQ96LU7 910 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 PI4K2AQ9BTU6 479 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 GPR88Q9GZN0 384 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 SDCBP2Q9H190 292 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 SMYD3Q9H7B4 428 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 CHMP5Q9NZZ3 219 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 MAN1B1Q9UKM7 699 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 FRMD4BQ9Y2L6 1034 aa15.7■□□□□ 0.1
PSME1-207ENST00000560420 ARNTLO00327 626 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 F11P03951 625 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 CYP2F1P24903 491 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 RPL13P26373 211 aaKnown RBP15.69■□□□□ 0.1
PSME1-207ENST00000560420 PSMC2P35998 433 aaKnown RBP15.69■□□□□ 0.1
PSME1-207ENST00000560420 NUBP1P53384 320 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 ADAM9Q13443 819 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 ASTLQ6HA08 431 aaPredicted RBP15.69■□□□□ 0.1
PSME1-207ENST00000560420 PHLDB3Q6NSJ2 640 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 VITQ6UXI7 678 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 FAM186BQ8IYM0 893 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 ZSCAN18Q8TBC5 510 aaPredicted RBP15.69■□□□□ 0.1
PSME1-207ENST00000560420 MYCBPAPQ8TBZ2 947 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 SMARCE1Q969G3 411 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 TRMT2BQ96GJ1 504 aaKnown RBP15.69■□□□□ 0.1
PSME1-207ENST00000560420 PCED1BQ96HM7 432 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 ARHGEF3Q9NR81 526 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 TMEM30AQ9NV96 361 aa15.69■□□□□ 0.1
PSME1-207ENST00000560420 CACNA1HO95180 2353 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 TULP1O00294 542 aaPredicted RBP15.68■□□□□ 0.1
PSME1-207ENST00000560420 SMC2O95347 1197 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 TRIM49P0CI25 452 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 TRIM49CP0CI26 452 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 CD44P16070 742 aaKnown RBP15.68■□□□□ 0.1
PSME1-207ENST00000560420 AOC1P19801 751 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 GABRR2P28476 465 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 ASPAP45381 313 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 NLRP12P59046 1061 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 STARD6P59095 220 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 TNNC1P63316 161 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 TCF15Q12870 199 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 BIRC3Q13489 604 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 TRPC3Q13507 836 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 VEPH1Q14D04 833 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 ZNF699Q32M78 642 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 FOXR2Q6PJQ5 311 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 VSTM1Q6UX27 236 aa15.68■□□□□ 0.1
PSME1-207ENST00000560420 CLEC17AQ6ZS10 378 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms