RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 DLL3Q9NYJ7 618 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 GMEB2Q9UKD1 530 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 RAB23Q9ULC3 237 aa14.61□□□□□ -0.07
SMAD3-214ENST00000560402 SOBPA7XYQ1 873 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 KPNA7A9QM74 516 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 CUTAO60888 179 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 SOAT2O75908 522 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 GCNT3O95395 438 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 GARTP22102 1010 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 DDX6P26196 483 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMAD3-214ENST00000560402 CTHP32929 405 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 CXCL12P48061 93 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 TSPY1Q01534 308 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 LMNB2Q03252 620 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 TAF12Q16514 161 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 NFE2Q16621 373 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-214ENST00000560402 DGKKQ5KSL6 1271 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 TSSK4Q6SA08 328 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 CRELD2Q6UXH1 353 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-214ENST00000560402 USP49Q70CQ1 688 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 DCLK2Q8N568 766 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 BPIFB1Q8TDL5 484 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 DNAJC19Q96DA6 116 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 LPIN3Q9BQK8 851 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 KIF9Q9HAQ2 790 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 THG1LQ9NWX6 298 aaKnown RBP14.6□□□□□ -0.07
SMAD3-214ENST00000560402 HOOK1Q9UJC3 728 aaKnown RBP14.6□□□□□ -0.07
SMAD3-214ENST00000560402 PCDHA7Q9UN72 937 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 PCDHB13Q9Y5F0 798 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 CLIC4Q9Y696 253 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 DNAH14Q0VDD8 3507 aa14.6□□□□□ -0.07
SMAD3-214ENST00000560402 FRMD3A2A2Y4 597 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 MYMKA6NI61 221 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 SLC38A8A6NNN8 435 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 PRR5-ARHGAP8B1AHC4 643 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 SPECC1L-ADORA2AF8WAN1 911 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 KIAA0391O15091 583 aaKnown RBP14.59□□□□□ -0.07
SMAD3-214ENST00000560402 HAPLN1P10915 354 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-214ENST00000560402 CMA1P23946 247 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 ADSSP30520 456 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 ARHGAP8P85298 464 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 CYP4F8P98187 520 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 WSCD1Q658N2 575 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 SYNPOQ8N3V7 929 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 CELF5Q8N6W0 485 aaKnown RBP14.59□□□□□ -0.07
SMAD3-214ENST00000560402 CACTINQ8WUQ7 758 aaKnown RBP14.59□□□□□ -0.07
SMAD3-214ENST00000560402 TRIM44Q96DX7 344 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-214ENST00000560402 IL21Q9HBE4 155 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 ABCB6Q9NP58 842 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 ABI2Q9NYB9 513 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-214ENST00000560402 RBAKQ9NYW8 714 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-214ENST00000560402 ITGA11Q9UKX5 1188 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 PCDHB5Q9Y5E4 795 aa14.59□□□□□ -0.07
SMAD3-214ENST00000560402 HELZP42694 1942 aaKnown RBP14.58□□□□□ -0.07
SMAD3-214ENST00000560402 LRP3O75074 770 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 PRAMEF12O95522 483 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 CSH1P0DML2 217 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 CSH2P0DML3 217 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 CNR2P34972 360 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 STAT6P42226 847 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 MYL7Q01449 175 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 LAIR1Q6GTX8 287 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 STXBP4Q6ZWJ1 553 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 SYCP3Q8IZU3 236 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 TMEM86AQ8N2M4 240 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 FAM213AQ9BRX8 229 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 RBSNQ9H1K0 784 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 TMEM206Q9H813 350 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 FAM13BQ9NYF5 915 aa14.58□□□□□ -0.08
SMAD3-214ENST00000560402 UXTQ9UBK9 157 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-214ENST00000560402 EXTL3O43909 919 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 HUS1O60921 280 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 ITGB3P05106 788 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 IDEP14735 1019 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 POLR2BP30876 1174 aaKnown RBP14.57□□□□□ -0.08
SMAD3-214ENST00000560402 AVPR1AP37288 418 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 SOX9P48436 509 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 RPL10AP62906 217 aaKnown RBP14.57□□□□□ -0.08
SMAD3-214ENST00000560402 TFAMQ00059 246 aaKnown RBP14.57□□□□□ -0.08
SMAD3-214ENST00000560402 SATB1Q01826 763 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 ITPRIPL2Q3MIP1 535 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 RBM43Q6ZSC3 357 aaKnown RBP14.57□□□□□ -0.08
SMAD3-214ENST00000560402 CCDC65Q8IXS2 484 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 CMTM8Q8IZV2 173 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 PDCL2Q8N4E4 241 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 C1orf127Q8N9H9 656 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 MRPS31Q92665 395 aaKnown RBP14.57□□□□□ -0.08
SMAD3-214ENST00000560402 ACBD6Q9BR61 282 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 GDAP2Q9NXN4 497 aa14.57□□□□□ -0.08
SMAD3-214ENST00000560402 PTPRDP23468 1912 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 GREB1Q4ZG55 1949 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 ANAPC1Q9H1A4 1944 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 F11P03951 625 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 TMEM191BP0C7N4 346 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 PCSK1P29120 753 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 HOXA6P31267 233 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 NLRP12P59046 1061 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 KCNA1Q09470 495 aa14.56□□□□□ -0.08
SMAD3-214ENST00000560402 BFSP1Q12934 665 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms