RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CACTIN-AS1Q8N1I8 211 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 IL22RA1Q8N6P7 574 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 C1orf127Q8N9H9 656 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 TAS1R2Q8TE23 839 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 PARD3BQ8TEW8 1205 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 HASPINQ8TF76 798 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 SEPT8Q92599 483 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 GAD1Q99259 594 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 ARID3AQ99856 593 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 PAAF1Q9BRP4 392 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 CCDC94Q9BW85 323 aaPredicted RBP5.63□□□□□ -1.51
SPG11-220ENST00000559933 INTS2Q9H0H0 1204 aaKnown RBP5.63□□□□□ -1.51
SPG11-220ENST00000559933 APOBEC3GQ9HC16 384 aaKnown RBP5.63□□□□□ -1.51
SPG11-220ENST00000559933 SIX2Q9NPC8 291 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 FAM207AQ9NSI2 230 aaPredicted RBP5.63□□□□□ -1.51
SPG11-220ENST00000559933 GCNT4Q9P109 453 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 CGNQ9P2M7 1197 aaKnown RBP5.63□□□□□ -1.51
SPG11-220ENST00000559933 SIX4Q9UIU6 781 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 POLIQ9UNA4 740 aa5.63□□□□□ -1.51
SPG11-220ENST00000559933 RANBP2P49792 3224 aaKnown RBP5.63□□□□□ -1.51
SPG11-220ENST00000559933 LAMA3Q16787 3333 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 A0A0U1RQF3 1178 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 SMIM28A0A1B0GU29 152 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 TTC26A0AVF1 554 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 ARL5CA6NH57 179 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 ENPP3O14638 875 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 HCRTO43612 131 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 CLSTN1O94985 981 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 FGFR1OPO95684 399 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 GNA14O95837 355 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 CST3P01034 146 aaPredicted RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 HLA-DRAP01903 254 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 C4BPAP04003 597 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 ITGB3P05106 788 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 KRT19P08727 400 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 TMEM191BP0C7N4 346 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 ZSCAN20P17040 1043 aaPredicted RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 TNNI1P19237 187 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 POLR2BP30876 1174 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 ABCD1P33897 745 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 PIK3CAP42336 1068 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 RAP1GAPP47736 663 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 YARSP54577 528 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 MYL6P60660 151 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 SNRPFP62306 86 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 NCBP1Q09161 790 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 BIRC3Q13489 604 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 MYBPC2Q14324 1141 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 TMEM132DQ14C87 1099 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 TRIP4Q15650 581 aaPredicted RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 NAB2Q15742 525 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 EPC2Q52LR7 807 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 E4F1Q66K89 784 aaPredicted RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 MFSD5Q6N075 450 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 CNKSR3Q6P9H4 555 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 IGF2-ASQ6U949 168 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 ALKAL1Q6UXT8 129 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 C15orf39Q6ZRI6 1047 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 ZNF365Q70YC5 407 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 INTS8Q75QN2 995 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 SPRED2Q7Z698 418 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 ZNF280BQ86YH2 543 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 VSTM4Q8IW00 320 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 GSTCDQ8NEC7 633 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 ANKRD20A12PQ8NF67 263 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 OR13H1Q8NG92 308 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 LMO3Q8TAP4 145 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 CXorf38Q8TB03 319 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 TMEM174Q8WUU8 243 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 CPLX3Q8WVH0 158 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 DPF3Q92784 378 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 CCDC51Q96ER9 411 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 ACAP3Q96P50 834 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 FNBP1Q96RU3 617 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPG11-220ENST00000559933 SEZ6LQ9BYH1 1024 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 MUC3BQ9H195 1237 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 GANQ9H2C0 597 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 RSAD1Q9HA92 442 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 METTL14Q9HCE5 456 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 TMEM8AQ9HCN3 771 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 SRA1Q9HD15 236 aaKnown RBP5.62□□□□□ -1.51
SPG11-220ENST00000559933 RGS18Q9NS28 235 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 CNTN3Q9P232 1028 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 KCNG1Q9UIX4 513 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 SIK3Q9Y2K2 1263 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 FHOD1Q9Y613 1164 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 KIAA1671Q9BY89 1806 aa5.62□□□□□ -1.51
SPG11-220ENST00000559933 LRRC10BA6NIK2 292 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 TBKBP1A7MCY6 615 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 TDRD15B5MCY1 1934 aaKnown RBP5.61□□□□□ -1.51
SPG11-220ENST00000559933 I3L4J1 428 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 MAPK13O15264 365 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 CBFA2T2O43439 604 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 DYRK3O43781 588 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 PHACTR2O75167 634 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 OFD1O75665 1012 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 SMNDC1O75940 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
SPG11-220ENST00000559933 NOL4O94818 638 aa5.61□□□□□ -1.51
SPG11-220ENST00000559933 DDHD2O94830 711 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms