RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 AVPR1BP47901 424 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 GCLCP48506 637 aaPredicted RBP4.16□□□□□ -1.74
CASC4-210ENST00000559550 SLC11A2P49281 568 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 NDUFV1P49821 464 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 BLOC1S1P78537 153 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 GPSM2P81274 684 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 MPP3Q13368 585 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 TUBB3Q13509 450 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 GBX1Q14549 363 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 CNN3Q15417 329 aaKnown RBP4.16□□□□□ -1.74
CASC4-210ENST00000559550 RBM20Q5T481 1227 aaKnown RBP4.16□□□□□ -1.74
CASC4-210ENST00000559550 VWA1Q6PCB0 445 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 CHST15Q7LFX5 561 aaPredicted RBP4.16□□□□□ -1.74
CASC4-210ENST00000559550 FAM156AQ8NDB6 213 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 MYCBPAPQ8TBZ2 947 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 ANKS1AQ92625 1134 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 SLC46A1Q96NT5 459 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 SPATA5L1Q9BVQ7 753 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 TTYH3Q9C0H2 523 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 SIK2Q9H0K1 926 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 BHMT2Q9H2M3 363 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 FAM204AQ9H8W3 233 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 CNNM1Q9NRU3 951 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 STK32BQ9NY57 414 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 FRMPD2Q68DX3 1309 aaPredicted RBP4.16□□□□□ -1.74
CASC4-210ENST00000559550 CFAP69A5D8W1 941 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 F5H697 171 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 MYO1FO00160 1098 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 YY2O15391 372 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 PROM1O43490 865 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 RHOP08100 348 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 ITGALP20701 1170 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.75
CASC4-210ENST00000559550 VPS53Q5VIR6 699 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 TMEM108Q6UXF1 575 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 CCDC149Q6ZUS6 474 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 TOR1AIP2Q8NFQ8 470 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 KBTBD7Q8WVZ9 684 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 MAML1Q92585 1016 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 HEPHQ9BQS7 1158 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 DPH1Q9BZG8 443 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 SMURF2Q9HAU4 748 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 PLEKHM1Q9Y4G2 1056 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 SPATA31A3Q5VYP0 1347 aa4.15□□□□□ -1.75
CASC4-210ENST00000559550 A0A087WWL8 130 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 TMEM233B4DJY2 109 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 BTN3A1O00481 513 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 MGST3O14880 152 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 PHGDHO43175 533 aaKnown RBP4.14□□□□□ -1.75
CASC4-210ENST00000559550 PEX1O43933 1283 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 ZBED1O96006 694 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 HRGP04196 525 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 PDHA1P08559 390 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 RHCEP18577 417 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 EN2P19622 333 aaPredicted RBP4.14□□□□□ -1.75
CASC4-210ENST00000559550 SLC7A1P30825 629 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 FOLR3P41439 243 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 LILRA4P59901 499 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 RHDQ02161 417 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 CTBP1Q13363 440 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 ZNF169Q14929 603 aaPredicted RBP4.14□□□□□ -1.75
CASC4-210ENST00000559550 LONRF3Q496Y0 759 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 KIAA0895LQ68EN5 471 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 OLFML1Q6UWY5 402 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 FAM109AQ8N4B1 249 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.14□□□□□ -1.75
CASC4-210ENST00000559550 SLC15A4Q8N697 577 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 DNAJC5GQ8N7S2 189 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 FBXL20Q96IG2 436 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 OSBPL9Q96SU4 736 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 AMBRA1Q9C0C7 1298 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 SYNPO2LQ9H987 977 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 FOXJ2Q9P0K8 574 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 XPR1Q9UBH6 696 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 CPNE7Q9UBL6 633 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 DMTF1Q9Y222 760 aa4.14□□□□□ -1.75
CASC4-210ENST00000559550 WDR27A2RRH5 827 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 ADM5C9JUS6 153 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 TRIAP1O43715 76 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 RHOBTB3O94955 611 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 CHRM2P08172 466 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 ELFN1P0C7U0 828 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 CD6P30203 668 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 SIM1P81133 766 aaPredicted RBP4.13□□□□□ -1.75
CASC4-210ENST00000559550 MRPS35P82673 323 aaKnown RBP4.13□□□□□ -1.75
CASC4-210ENST00000559550 SP2Q02086 613 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 IQCB1Q15051 598 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 KIAA0753Q2KHM9 967 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 ZIK1Q3SY52 487 aaPredicted RBP4.13□□□□□ -1.75
CASC4-210ENST00000559550 AMOTQ4VCS5 1084 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 RNF220Q5VTB9 566 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 ZNF783Q6ZMS7 281 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 SRGAP1Q7Z6B7 1085 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 DGKHQ86XP1 1220 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 ZNF280BQ86YH2 543 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 B3GALNT2Q8NCR0 500 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 OR6B3Q8NGW1 331 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 ACTRT2Q8TDY3 377 aa4.13□□□□□ -1.75
CASC4-210ENST00000559550 LRTOMTQ8WZ04 291 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms