RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 HOXD8P13378 290 aaPredicted RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 ATF7P17544 494 aaPredicted RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 ARF4P18085 180 aaPredicted RBP11.68□□□□□ -0.54
SPG11-217ENST00000559511 KLRC2P26717 231 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 ZFYVE27Q5T4F4 411 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 C6orf118Q5T5N4 469 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 IQSEC1Q6DN90 963 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 OR6J1Q8NGC5 347 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 TRAIPQ9BWF2 469 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 ANAPC5Q9UJX4 755 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 AKT3Q9Y243 479 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 CEP83Q9Y592 693 aa11.68□□□□□ -0.54
SPG11-217ENST00000559511 GMNCA6NCL1 334 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 GOLGA8SH3BPF8 625 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 RASGRF2O14827 1237 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 LIASO43766 372 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 MCF2P10911 925 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 RFC1P35251 1148 aaPredicted RBP11.67□□□□□ -0.54
SPG11-217ENST00000559511 MMP13P45452 471 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 YWHAEP62258 255 aaKnown RBP11.67□□□□□ -0.54
SPG11-217ENST00000559511 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
SPG11-217ENST00000559511 TAP1Q03518 808 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 POU5F1BQ06416 359 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 AUHQ13825 339 aaKnown RBP11.67□□□□□ -0.54
SPG11-217ENST00000559511 PIGHQ14442 188 aaPredicted RBP11.67□□□□□ -0.54
SPG11-217ENST00000559511 SLC10A6Q3KNW5 377 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 TNFAIP8L3Q5GJ75 292 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 MORN1Q5T089 497 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 LRRC38Q5VT99 294 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 MTHFD1LQ6UB35 978 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 SPOCD1Q6ZMY3 1216 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 ZNF365Q70YC5 407 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
SPG11-217ENST00000559511 NIPA2Q8N8Q9 360 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 GLIS1Q8NBF1 620 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 SLC4A11Q8NBS3 891 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 JOSD2Q8TAC2 188 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 RBM41Q96IZ5 413 aaKnown RBP11.67□□□□□ -0.54
SPG11-217ENST00000559511 ELOVL4Q9GZR5 314 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 LHX5Q9H2C1 402 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 CNOT10Q9H9A5 744 aaKnown RBP11.67□□□□□ -0.54
SPG11-217ENST00000559511 DNPEPQ9ULA0 475 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 SCN1AP35498 2009 aa11.67□□□□□ -0.54
SPG11-217ENST00000559511 AGTP01019 485 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 CHN1P15882 459 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 ZNF157P51786 506 aaPredicted RBP11.66□□□□□ -0.54
SPG11-217ENST00000559511 CAV1Q03135 178 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 QPCTQ16769 361 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 LONRF1Q17RB8 773 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 PRAMEF19Q5SWL8 479 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 MARCH8Q5T0T0 291 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 ARFGAP1Q8N6T3 406 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 CCDC89Q8N998 374 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 CPXM1Q96SM3 734 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 STRIP2Q9ULQ0 834 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 hCG_1818297A0A087WSY0 165 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 LRRD1A4D1F6 860 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 MED7O43513 233 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 TJP3O95049 919 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 TTC4O95801 387 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 ERBB2P04626 1255 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 PSMA2P25787 234 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 CDKN2BP42772 138 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 TNFAIP2Q03169 654 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 MAP2K5Q13163 448 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 KYNUQ16719 465 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 P3H1Q32P28 736 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 CCDC38Q502W7 563 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 IZUMO3Q5VZ72 239 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 MFSD5Q6N075 450 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 B4GALNT4Q76KP1 1039 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 GSTA5Q7RTV2 222 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 HAUS1Q96CS2 278 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 SELENOSQ9BQE4 189 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 FLRT1Q9NZU1 646 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 RALGAPA2Q2PPJ7 1873 aa11.66□□□□□ -0.54
SPG11-217ENST00000559511 MANSC4A6NHS7 340 aaPredicted RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 C3orf70A6NLC5 250 aaPredicted RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 SIGLEC16A6NMB1 481 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 TSPAN1O60635 241 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 CILPO75339 1184 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 ZSCAN5DPP0CG00 497 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 KRT3P12035 628 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 ETS1P14921 441 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 POLR2BP30876 1174 aaKnown RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 PTPN7P35236 360 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 CETN2P41208 172 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 PSMC4P43686 418 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 PSMC1P62191 440 aaKnown RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 SLC25A11Q02978 314 aaKnown RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 PTPN11Q06124 597 aaPredicted RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 TAF1CQ15572 869 aaPredicted RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 GRIK4Q16099 956 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 DGKDQ16760 1214 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 SMTNL2Q2TAL5 461 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 TFDP3Q5H9I0 405 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 ERMARDQ5T6L9 678 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 DRICH1Q6PGQ1 229 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms