RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TKTP29401 623 aaKnown RBP17.61■□□□□ 0.41
TPM1-219ENST00000559397 WSCD1Q658N2 575 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 RNF10Q8N5U6 811 aaKnown RBP17.61■□□□□ 0.41
TPM1-219ENST00000559397 UBR7Q8N806 425 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 APPL2Q8NEU8 664 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 KBTBD7Q8WVZ9 684 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 MRPL45Q9BRJ2 306 aaKnown RBP17.61■□□□□ 0.41
TPM1-219ENST00000559397 CHST7Q9NS84 486 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 NOCTQ9UK39 431 aaKnown RBP17.61■□□□□ 0.41
TPM1-219ENST00000559397 MTUS1Q9ULD2 1270 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 INTUQ9ULD6 942 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 NME7Q9Y5B8 376 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 TIMM13Q9Y5L4 95 aaPredicted RBP17.61■□□□□ 0.41
TPM1-219ENST00000559397 ARHGEF37A1IGU5 675 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 CYP26A1O43174 497 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 WEE2P0C1S8 567 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 GTF2F1P35269 517 aaKnown RBP eCLIP17.61■□□□□ 0.41
TPM1-219ENST00000559397 KRT17Q04695 432 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 TMEM86AQ8N2M4 240 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 SPPL3Q8TCT6 385 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 EPS8L1Q8TE68 723 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 SECISBP2LQ93073 1101 aaKnown RBP17.61■□□□□ 0.41
TPM1-219ENST00000559397 HERC2P3Q9BVR0 1158 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 SLC28A3Q9HAS3 691 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 SALL4Q9UJQ4 1053 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 DSEQ9UL01 958 aa17.61■□□□□ 0.41
TPM1-219ENST00000559397 CTAGE9A4FU28 777 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 GABRDO14764 452 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 CHRNB2P17787 502 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 ACO1P21399 889 aaKnown RBP17.6■□□□□ 0.41
TPM1-219ENST00000559397 TNFAIP3P21580 790 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 WARSP23381 471 aaKnown RBP17.6■□□□□ 0.41
TPM1-219ENST00000559397 MRPL58Q14197 206 aaKnown RBP17.6■□□□□ 0.41
TPM1-219ENST00000559397 USP41Q3LFD5 358 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 RTP2Q5QGT7 225 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 OSTM1Q86WC4 334 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 GLYCTKQ8IVS8 523 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 ADGRF2Q8IZF7 708 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 SPATA18Q8TC71 538 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 B3GALT6Q96L58 329 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 PACSIN1Q9BY11 444 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 FAM124BQ9H5Z6 455 aaPredicted RBP17.6■□□□□ 0.41
TPM1-219ENST00000559397 CERS4Q9HA82 394 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 ALG13Q9NP73 1137 aaKnown RBP17.6■□□□□ 0.41
TPM1-219ENST00000559397 CISHQ9NSE2 258 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 STK39Q9UEW8 545 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 CNTN6Q9UQ52 1028 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 LZTS1Q9Y250 596 aa17.6■□□□□ 0.41
TPM1-219ENST00000559397 MACROD2A1Z1Q3 448 aa17.59■□□□□ 0.41
TPM1-219ENST00000559397 URI1O94763 535 aaPredicted RBP17.59■□□□□ 0.41
TPM1-219ENST00000559397 USP8P40818 1118 aa17.59■□□□□ 0.41
TPM1-219ENST00000559397 INCA1Q0VD86 236 aa17.59■□□□□ 0.41
TPM1-219ENST00000559397 VARS2Q5ST30 1063 aaKnown RBP17.59■□□□□ 0.41
TPM1-219ENST00000559397 NOP9Q86U38 636 aaKnown RBP17.59■□□□□ 0.41
TPM1-219ENST00000559397 SLC20A1Q8WUM9 679 aa17.59■□□□□ 0.41
TPM1-219ENST00000559397 NAPGQ99747 312 aaPredicted RBP17.59■□□□□ 0.41
TPM1-219ENST00000559397 RTP3Q9BQQ7 232 aa17.59■□□□□ 0.41
TPM1-219ENST00000559397 TTPALQ9BTX7 342 aa17.59■□□□□ 0.41
TPM1-219ENST00000559397 C11orf84Q9BUA3 381 aaPredicted RBP17.59■□□□□ 0.41
TPM1-219ENST00000559397 H3BNC9 293 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 OAZ2O95190 189 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 H2AFZP0C0S5 128 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 CYP11B1P15538 503 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 DNAJB1P25685 340 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 YWHAHQ04917 246 aaPredicted RBP17.58■□□□□ 0.41
TPM1-219ENST00000559397 UBE3AQ05086 875 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 KIAA0319Q5VV43 1072 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 H2AFVQ71UI9 128 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 SLC47A2Q86VL8 602 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 CEP57Q86XR8 500 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 VPS52Q8N1B4 723 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 FBXO22Q8NEZ5 403 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 TRIM58Q8NG06 486 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 WHAMMQ8TF30 809 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 POF1BQ8WVV4 589 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 DDX1Q92499 740 aaKnown RBP17.58■□□□□ 0.41
TPM1-219ENST00000559397 ZBP1Q9H171 429 aa17.58■□□□□ 0.41
TPM1-219ENST00000559397 TRIOBPQ9H2D6 2365 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 EPOPA6NHQ4 379 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 GRM6O15303 877 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 HCRTO43612 131 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 CILPO75339 1184 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 CD58P19256 250 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 LMO2P25791 158 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 GNL1P36915 607 aaPredicted RBP17.58■□□□□ 0.4
TPM1-219ENST00000559397 DSG1Q02413 1049 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 GPM6BQ13491 265 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 TUBB2AQ13885 445 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 OVOS1Q6IE37 1185 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 METTL23Q86XA0 190 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 ARNTL2Q8WYA1 636 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 TUBB2BQ9BVA1 445 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 PUF60Q9UHX1 559 aaKnown RBP17.58■□□□□ 0.4
TPM1-219ENST00000559397 BARX2Q9UMQ3 279 aaPredicted RBP17.58■□□□□ 0.4
TPM1-219ENST00000559397 MRFAP1Q9Y605 127 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 CAPN6Q9Y6Q1 641 aa17.58■□□□□ 0.4
TPM1-219ENST00000559397 A0A0A6YYK5 440 aaPredicted RBP17.57■□□□□ 0.4
TPM1-219ENST00000559397 CTIFO43310 598 aaKnown RBP17.57■□□□□ 0.4
TPM1-219ENST00000559397 TBC1D4O60343 1298 aa17.57■□□□□ 0.4
TPM1-219ENST00000559397 LILRB3O75022 631 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms