RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CLIC2O15247 247 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 SP9P0CG40 484 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 DLATP10515 647 aaKnown RBP19.05■□□□□ 0.64
TPM1-218ENST00000559281 CMA1P23946 247 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 TARSP26639 723 aaKnown RBP19.05■□□□□ 0.64
TPM1-218ENST00000559281 CASP1P29466 404 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 CYP2J2P51589 502 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 KRT85P78386 507 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 PSMD2Q13200 908 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 PSMD6Q15008 389 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 BMT2Q1RMZ1 405 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 SOWAHAQ2M3V2 549 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 STXBP5Q5T5C0 1151 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 SPATA2LQ8IUW3 424 aaPredicted RBP19.05■□□□□ 0.64
TPM1-218ENST00000559281 SPATA32Q96LK8 384 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 TMLHEQ9NVH6 421 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 SERTAD1Q9UHV2 236 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 GTF3C4Q9UKN8 822 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 FBXO4Q9UKT5 387 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 PIAS3Q9Y6X2 628 aa19.05■□□□□ 0.64
TPM1-218ENST00000559281 SOBPA7XYQ1 873 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 MYL1P05976 194 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 ACAT1P24752 427 aaKnown RBP19.04■□□□□ 0.64
TPM1-218ENST00000559281 DDX6P26196 483 aaKnown RBP eCLIP19.04■□□□□ 0.64
TPM1-218ENST00000559281 FCHO2Q0JRZ9 810 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 MAPRE1Q15691 268 aaKnown RBP19.04■□□□□ 0.64
TPM1-218ENST00000559281 ZNF528Q3MIS6 628 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 ARHGAP29Q52LW3 1261 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 C4orf50Q6ZRC1 276 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 TRAPPC11Q7Z392 1133 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 C12orf56Q8IXR9 622 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 CCDC127Q96BQ5 260 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 PAGE5Q96GU1 130 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 FUBP3Q96I24 572 aaKnown RBP eCLIP19.04■□□□□ 0.64
TPM1-218ENST00000559281 MMS19Q96T76 1030 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 C8orf33Q9H7E9 229 aaPredicted RBP19.04■□□□□ 0.64
TPM1-218ENST00000559281 IL21Q9HBE4 155 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 EXOC1Q9NV70 894 aa19.04■□□□□ 0.64
TPM1-218ENST00000559281 THG1LQ9NWX6 298 aaKnown RBP19.04■□□□□ 0.64
TPM1-218ENST00000559281 UXTQ9UBK9 157 aaPredicted RBP19.04■□□□□ 0.64
TPM1-218ENST00000559281 NDRG2Q9UN36 371 aaKnown RBP19.04■□□□□ 0.64
TPM1-218ENST00000559281 PTPRZ1P23471 2315 aaPredicted RBP19.03■□□□□ 0.64
TPM1-218ENST00000559281 EXOC3O60645 756 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 FAM163BP0C2L3 166 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 AVPR1AP37288 418 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 KPNA1P52294 538 aaPredicted RBP19.03■□□□□ 0.64
TPM1-218ENST00000559281 CYP4F8P98187 520 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 PLCB2Q00722 1185 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 CYP24A1Q07973 514 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 CFAP221Q4G0U5 840 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 CELF5Q8N6W0 485 aaKnown RBP19.03■□□□□ 0.64
TPM1-218ENST00000559281 BPIFB1Q8TDL5 484 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 MRPS31Q92665 395 aaKnown RBP19.03■□□□□ 0.64
TPM1-218ENST00000559281 FAM84AQ96KN4 292 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 CGRRF1Q99675 332 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 MKNK1Q9BUB5 465 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 CDH9Q9ULB4 789 aa19.03■□□□□ 0.64
TPM1-218ENST00000559281 MAGED2Q9UNF1 606 aaPredicted RBP19.03■□□□□ 0.64
TPM1-218ENST00000559281 PTPRJQ12913 1337 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 SCN1AP35498 2009 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 LMNAP02545 664 aaKnown RBP19.02■□□□□ 0.64
TPM1-218ENST00000559281 HMGA1P17096 107 aaKnown RBP19.02■□□□□ 0.64
TPM1-218ENST00000559281 CYP2F1P24903 491 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 NLRP12P59046 1061 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 TRPC3Q13507 836 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 DDR2Q16832 855 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 SCARA3Q6AZY7 606 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 LIMS2Q7Z4I7 341 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 OSTM1Q86WC4 334 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 GPIHBP1Q8IV16 184 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 CMTM8Q8IZV2 173 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 RSPRY1Q96DX4 576 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 PKMYT1Q99640 499 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 IER2Q9BTL4 223 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 SLC46A2Q9BY10 475 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 MAGEC2Q9UBF1 373 aaPredicted RBP19.02■□□□□ 0.64
TPM1-218ENST00000559281 R4GN57 208 aa19.02■□□□□ 0.64
TPM1-218ENST00000559281 MYH15Q9Y2K3 1946 aa19.02■□□□□ 0.63
TPM1-218ENST00000559281 A0A1B0GVL5 298 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 ARNTLO00327 626 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 ACTN4O43707 911 aaKnown RBP19.01■□□□□ 0.63
TPM1-218ENST00000559281 CST3P01034 146 aaPredicted RBP19.01■□□□□ 0.63
TPM1-218ENST00000559281 F11P03951 625 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 PFKFB1P16118 471 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 WARSP23381 471 aaKnown RBP19.01■□□□□ 0.63
TPM1-218ENST00000559281 CCNE1P24864 410 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 AP3M2P53677 418 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 CSTF1Q05048 431 aaKnown RBP19.01■□□□□ 0.63
TPM1-218ENST00000559281 PPP2R5DQ14738 602 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 FAM171BQ6P995 826 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 GRAMD1CQ8IYS0 662 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 ADSSL1Q8N142 457 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 CCDC47Q96A33 483 aaKnown RBP19.01■□□□□ 0.63
TPM1-218ENST00000559281 SYT15Q9BQS2 421 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 SCAND2PQ9GZW5 306 aaPredicted RBP19.01■□□□□ 0.63
TPM1-218ENST00000559281 SNX25Q9H3E2 840 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 LMAN1LQ9HAT1 526 aa19.01■□□□□ 0.63
TPM1-218ENST00000559281 MYBPHLA2RUH7 354 aa19■□□□□ 0.63
TPM1-218ENST00000559281 SHISA7A6NL88 538 aa19■□□□□ 0.63
TPM1-218ENST00000559281 PHACTR2O75167 634 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms