RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CLNS1AP54105 237 aaKnown RBP17.45■□□□□ 0.38
SPG11-215ENST00000559193 GDF10P55107 478 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 FSTL1Q12841 308 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 SETDB1Q15047 1291 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 ANKRD22Q5VYY1 191 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 WDR49Q8IV35 697 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 LRRC8CQ8TDW0 803 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 C10orf82Q8WW14 230 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 LRMDAQ9H2I8 198 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 C10orf88Q9H8K7 445 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 SAE1Q9UBE0 346 aaPredicted RBP17.45■□□□□ 0.38
SPG11-215ENST00000559193 LCTP09848 1927 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 CDH5P33151 784 aaPredicted RBP17.45■□□□□ 0.38
SPG11-215ENST00000559193 HIF1AQ16665 826 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 SCYL3Q8IZE3 742 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 ZNF280CQ8ND82 737 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 WDR83Q9BRX9 315 aaKnown RBP17.45■□□□□ 0.38
SPG11-215ENST00000559193 NIFKQ9BYG3 293 aaKnown RBP17.45■□□□□ 0.38
SPG11-215ENST00000559193 PDGFDQ9GZP0 370 aaPredicted RBP17.45■□□□□ 0.38
SPG11-215ENST00000559193 NIF3L1Q9GZT8 377 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 PPCSQ9HAB8 311 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 RABGEF1Q9UJ41 708 aa17.45■□□□□ 0.38
SPG11-215ENST00000559193 ATP2A1O14983 1001 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 ADCY3O60266 1144 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 TARSP26639 723 aaKnown RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 ZNF280AP59817 542 aaPredicted RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 DYNLT1P63172 113 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 TAP1Q03518 808 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 MSS51Q4VC12 460 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 ZBTB33Q86T24 672 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 VSIG1Q86XK7 387 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 CPT1BQ92523 772 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 RSRC1Q96IZ7 334 aaKnown RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 TMEM237Q96Q45 408 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 LRRC37BQ96QE4 947 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 RAB3IPQ96QF0 476 aaPredicted RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 TEX13BQ9BXU2 312 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 DIAPH2O60879 1101 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 ITGBL1O95965 494 aaPredicted RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 PTPRAP18433 802 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 CTCFP49711 727 aaPredicted RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 GEMIN4P57678 1058 aaKnown RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 OTUD4Q01804 1114 aaKnown RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 SLC25A11Q02978 314 aaKnown RBP17.44■□□□□ 0.38
SPG11-215ENST00000559193 TFDP1Q14186 410 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 FNBP1LQ5T0N5 605 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 HHATQ5VTY9 493 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 LVRNQ6Q4G3 990 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 ACTL9Q8TC94 416 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 ZNF518BQ9C0D4 1074 aa17.44■□□□□ 0.38
SPG11-215ENST00000559193 NDC80O14777 642 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 WFS1O76024 890 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 WEE2P0C1S8 567 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 KRT4P19013 534 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 SSTR1P30872 391 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 AP3M2P53677 418 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 ATP11AP98196 1134 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 PARP6Q2NL67 630 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 SMTNL2Q2TAL5 461 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 SCARA5Q6ZMJ2 495 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 POLNQ7Z5Q5 900 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 DHX37Q8IY37 1157 aaKnown RBP17.43■□□□□ 0.38
SPG11-215ENST00000559193 ARFGAP1Q8N6T3 406 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 ZNF570Q96NI8 536 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 PCYT2Q99447 389 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 CYLDQ9NQC7 956 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 TJP2Q9UDY2 1190 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 HAO1Q9UJM8 370 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 PCDHGC3Q9UN70 934 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 SNCAIPQ9Y6H5 919 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 IGKV6D-21A0A0A0MT36 114 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 PIAS1O75925 651 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 ATP5HO75947 161 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 EIF4BP23588 611 aaKnown RBP17.43■□□□□ 0.38
SPG11-215ENST00000559193 IL1R2P27930 398 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 ICAM3P32942 547 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 RFC1P35251 1148 aaPredicted RBP17.43■□□□□ 0.38
SPG11-215ENST00000559193 TARBP2Q15633 366 aaKnown RBP17.43■□□□□ 0.38
SPG11-215ENST00000559193 ZPBP2Q6X784 338 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 OTOAQ7RTW8 1153 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 PPIL6Q8IXY8 311 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 C12orf42Q96LP6 360 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 ZWILCHQ9H900 591 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 SSU72Q9NP77 194 aaKnown RBP17.43■□□□□ 0.38
SPG11-215ENST00000559193 FZD1Q9UP38 647 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 AGTPBP1Q9UPW5 1226 aa17.43■□□□□ 0.38
SPG11-215ENST00000559193 DCTN3O75935 186 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 T-ENOLP0DO92 83 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 PSMA2P25787 234 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 RFC5P40937 340 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 GRM1Q13255 1194 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 PTPN20Q4JDL3 420 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 DENND1BQ6P3S1 775 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 KIRREL3Q8IZU9 778 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 NAT8LQ8N9F0 302 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 JOSD2Q8TAC2 188 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 MZB1Q8WU39 189 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 ZNF75CPQ92670 426 aaPredicted RBP17.42■□□□□ 0.38
SPG11-215ENST00000559193 MIEF2Q96C03 454 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 DHRS4Q9BTZ2 278 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms