RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 DNASE1L2Q92874 299 aa23.02■■□□□ 1.28
CRNDE-205ENST00000558952 KCTD10Q9H3F6 313 aa23.02■■□□□ 1.28
CRNDE-205ENST00000558952 GTF3C4Q9UKN8 822 aa23.02■■□□□ 1.28
CRNDE-205ENST00000558952 KANSL1LA0AUZ9 987 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 CALUO43852 315 aaPredicted RBP23.01■■□□□ 1.27
CRNDE-205ENST00000558952 RHOBTB3O94955 611 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 CST3P01034 146 aaPredicted RBP23.01■■□□□ 1.27
CRNDE-205ENST00000558952 NR3C1P04150 777 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 VIPR2P41587 438 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 AP3M2P53677 418 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 DPYDQ12882 1025 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 BIRC3Q13489 604 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 GPR158Q5T848 1215 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 VITQ6UXI7 678 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 GAREM2Q75VX8 874 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 YAF2Q8IY57 180 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 IRF7Q92985 503 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 CDH9Q9ULB4 789 aa23.01■■□□□ 1.27
CRNDE-205ENST00000558952 DPYSL4O14531 572 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 CSH1P0DML2 217 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 CSH2P0DML3 217 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 WARSP23381 471 aaKnown RBP23■■□□□ 1.27
CRNDE-205ENST00000558952 GDI1P31150 447 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 ATICP31939 592 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 CASP4P49662 377 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 MAPRE1Q15691 268 aaKnown RBP23■■□□□ 1.27
CRNDE-205ENST00000558952 WDR72Q3MJ13 1102 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 STXBP5Q5T5C0 1151 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 C4orf50Q6ZRC1 276 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 MFSD6LQ8IWD5 586 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 PJA1Q8NG27 643 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 TMEM174Q8WUU8 243 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 KBTBD7Q8WVZ9 684 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 SYAP1Q96A49 352 aaPredicted RBP23■■□□□ 1.27
CRNDE-205ENST00000558952 FUBP3Q96I24 572 aaKnown RBP eCLIP23■■□□□ 1.27
CRNDE-205ENST00000558952 SYT15Q9BQS2 421 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 FOXQ1Q9C009 403 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 SNX25Q9H3E2 840 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 FAM86C1Q9NVL1 165 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 DMAC2Q9NW81 257 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 FRMD4BQ9Y2L6 1034 aa23■■□□□ 1.27
CRNDE-205ENST00000558952 HEPACAM2A8MVW5 462 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 ZNF263O14978 683 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 HCRTO43612 131 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 DCNP07585 359 aaKnown RBP22.99■■□□□ 1.27
CRNDE-205ENST00000558952 CYP2F1P24903 491 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 MRE11P49959 708 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 UBXN2BQ14CS0 331 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 CFAP221Q4G0U5 840 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 CEP135Q66GS9 1140 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 TPRG1Q6ZUI0 275 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 LIMS2Q7Z4I7 341 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 PARD3BQ8TEW8 1205 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 ZNF516Q92618 1163 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 PKMYT1Q99640 499 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 TASP1Q9H6P5 420 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 ZMYM5Q9UJ78 669 aa22.99■■□□□ 1.27
CRNDE-205ENST00000558952 MAGED2Q9UNF1 606 aaPredicted RBP22.99■■□□□ 1.27
CRNDE-205ENST00000558952 MYBPHLA2RUH7 354 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 LRRIQ3A6PVS8 624 aaPredicted RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 STAU1O95793 577 aaKnown RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 GPR15P49685 360 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 MYL6P60660 151 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 PSMC1P62191 440 aaKnown RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 CYP4F8P98187 520 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 KCNB1Q14721 858 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 DDR2Q16832 855 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 ARID3BQ8IVW6 561 aaPredicted RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 DDX23Q9BUQ8 820 aaKnown RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 GZF1Q9H116 711 aaPredicted RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 IL21Q9HBE4 155 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 HEBP1Q9NRV9 189 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 MAGEC2Q9UBF1 373 aaPredicted RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 UXTQ9UBK9 157 aaPredicted RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 NXF1Q9UBU9 619 aaKnown RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 TRAF3IP3Q9Y228 551 aa22.98■■□□□ 1.27
CRNDE-205ENST00000558952 MRPS17Q9Y2R5 130 aaKnown RBP22.98■■□□□ 1.27
CRNDE-205ENST00000558952 ATP2C2O75185 946 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 TACC1O75410 805 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 PDGFRBP09619 1106 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 FAM163BP0C2L3 166 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 LMO2P25791 158 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 GNL1P36915 607 aaPredicted RBP22.97■■□□□ 1.27
CRNDE-205ENST00000558952 ANGPT1Q15389 498 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 FAM171BQ6P995 826 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 ZNF852Q6ZMS4 543 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 SCN4BQ8IWT1 228 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 OR6B3Q8NGW1 331 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 PLEKHO2Q8TD55 490 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 NELL2Q99435 816 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 MRPL45Q9BRJ2 306 aaKnown RBP22.97■■□□□ 1.27
CRNDE-205ENST00000558952 MAPK8IP1Q9UQF2 711 aa22.97■■□□□ 1.27
CRNDE-205ENST00000558952 FAM170BA6NMN3 283 aa22.96■■□□□ 1.27
CRNDE-205ENST00000558952 HMGA1P17096 107 aaKnown RBP22.96■■□□□ 1.27
CRNDE-205ENST00000558952 NLRP12P59046 1061 aa22.96■■□□□ 1.27
CRNDE-205ENST00000558952 CLDN10P78369 228 aa22.96■■□□□ 1.27
CRNDE-205ENST00000558952 CYP27A1Q02318 531 aa22.96■■□□□ 1.27
CRNDE-205ENST00000558952 CCDC142Q17RM4 750 aa22.96■■□□□ 1.27
CRNDE-205ENST00000558952 ZNF699Q32M78 642 aa22.96■■□□□ 1.27
CRNDE-205ENST00000558952 SDHAF4Q5VUM1 108 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms