RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TRMT61BQ9BVS5 477 aaKnown RBP18.27■□□□□ 0.52
LRRC28-210ENST00000558879 SLITRK6Q9H5Y7 841 aa18.27■□□□□ 0.52
LRRC28-210ENST00000558879 ABCB6Q9NP58 842 aa18.27■□□□□ 0.52
LRRC28-210ENST00000558879 PCDHB5Q9Y5E4 795 aa18.27■□□□□ 0.52
LRRC28-210ENST00000558879 HEPACAM2A8MVW5 462 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 HCRTO43612 131 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 HMGA1P17096 107 aaKnown RBP18.26■□□□□ 0.51
LRRC28-210ENST00000558879 ACAT1P24752 427 aaKnown RBP18.26■□□□□ 0.51
LRRC28-210ENST00000558879 TARSP26639 723 aaKnown RBP18.26■□□□□ 0.51
LRRC28-210ENST00000558879 CDC25CP30307 473 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 CYP2J2P51589 502 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 CDR1P51861 262 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 FCHO2Q0JRZ9 810 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 MYO1EQ12965 1108 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 STK4Q13043 487 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 CCDC142Q17RM4 750 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 KMT5BQ4FZB7 885 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 TRAPPC11Q7Z392 1133 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 TMEM150AQ86TG1 271 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 IRF7Q92985 503 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 HPDLQ96IR7 371 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 ATXN3LQ9H3M9 355 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 BRD9Q9H8M2 597 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 OBP2AQ9NY56 170 aa18.26■□□□□ 0.51
LRRC28-210ENST00000558879 MTF2Q9Y483 593 aaPredicted RBP18.26■□□□□ 0.51
LRRC28-210ENST00000558879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.25■□□□□ 0.51
LRRC28-210ENST00000558879 GFRA3O60609 400 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
LRRC28-210ENST00000558879 GDI1P31150 447 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 MAGEA9P43362 315 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 LHX1P48742 406 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 GPR15P49685 360 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 CYP4F8P98187 520 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 UBXN2BQ14CS0 331 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 CFAP221Q4G0U5 840 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 ARID3BQ8IVW6 561 aaPredicted RBP18.25■□□□□ 0.51
LRRC28-210ENST00000558879 ZNF687Q8N1G0 1237 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 RDH13Q8NBN7 331 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 PLEKHO2Q8TD55 490 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 CLDN23Q96B33 292 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 FUBP3Q96I24 572 aaKnown RBP eCLIP18.25■□□□□ 0.51
LRRC28-210ENST00000558879 PI4K2AQ9BTU6 479 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 KCTD10Q9H3F6 313 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 EXOC1Q9NV70 894 aa18.25■□□□□ 0.51
LRRC28-210ENST00000558879 PRR23AA6NEV1 266 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 PRAMEF12O95522 483 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 STAU1O95793 577 aaKnown RBP18.24■□□□□ 0.51
LRRC28-210ENST00000558879 DLATP10515 647 aaKnown RBP18.24■□□□□ 0.51
LRRC28-210ENST00000558879 CD72P21854 359 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 PCSK1P29120 753 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 PSMD2Q13200 908 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 FZD5Q13467 585 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 ARHGAP15Q53QZ3 475 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 GPR158Q5T848 1215 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 FAM171BQ6P995 826 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 FRMD5Q7Z6J6 570 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 SLC9A9Q8IVB4 645 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 C1orf210Q8IVY1 113 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 GOLGA5Q8TBA6 731 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 FAM200AQ8TCP9 573 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 GIPC2Q8TF65 315 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 ZNF516Q92618 1163 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 FNBP1Q96RU3 617 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 TASP1Q9H6P5 420 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 DMAC2Q9NW81 257 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 ZMYM5Q9UJ78 669 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 GTF3C4Q9UKN8 822 aa18.24■□□□□ 0.51
LRRC28-210ENST00000558879 RIF1Q5UIP0 2472 aaKnown RBP18.24■□□□□ 0.51
LRRC28-210ENST00000558879 ZFHX2Q9C0A1 2572 aaPredicted RBP18.23■□□□□ 0.51
LRRC28-210ENST00000558879 A0A1W2PQ27 194 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 A0A1W2PQ64 194 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 A0A1W2PQD8 194 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 FAM170BA6NMN3 283 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 TULP1O00294 542 aaPredicted RBP18.23■□□□□ 0.51
LRRC28-210ENST00000558879 CHADO15335 359 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 TADA3O75528 432 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 NOL4O94818 638 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 CST3P01034 146 aaPredicted RBP18.23■□□□□ 0.51
LRRC28-210ENST00000558879 F11P03951 625 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 CSH1P0DML2 217 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 CSH2P0DML3 217 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 TNNI1P19237 187 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 WARSP23381 471 aaKnown RBP18.23■□□□□ 0.51
LRRC28-210ENST00000558879 SYKP43405 635 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 RPS9P46781 194 aaKnown RBP18.23■□□□□ 0.51
LRRC28-210ENST00000558879 NDUFA8P51970 172 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 NLRP12P59046 1061 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 ZNF852Q6ZMS4 543 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 ASCL5Q7RTU5 278 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 MAML2Q8IZL2 1156 aaPredicted RBP18.23■□□□□ 0.51
LRRC28-210ENST00000558879 STKLD1Q8NE28 680 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 TRMT2BQ96GJ1 504 aaKnown RBP18.23■□□□□ 0.51
LRRC28-210ENST00000558879 GCNAQ96QF7 691 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 NELL2Q99435 816 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 SYT15Q9BQS2 421 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 BCO2Q9BYV7 579 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 SCAND2PQ9GZW5 306 aaPredicted RBP18.23■□□□□ 0.51
LRRC28-210ENST00000558879 CDH9Q9ULB4 789 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 NME7Q9Y5B8 376 aa18.23■□□□□ 0.51
LRRC28-210ENST00000558879 ATP6V1DQ9Y5K8 247 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms