RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 GCNAQ96QF7 691 aa16.39■□□□□ 0.21
RPL28-207ENST00000558815 MRPL45Q9BRJ2 306 aaKnown RBP16.39■□□□□ 0.21
RPL28-207ENST00000558815 SNX25Q9H3E2 840 aa16.39■□□□□ 0.21
RPL28-207ENST00000558815 ZFP14Q9HCL3 533 aa16.39■□□□□ 0.21
RPL28-207ENST00000558815 SLC2A4RGQ9NR83 387 aa16.39■□□□□ 0.21
RPL28-207ENST00000558815 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
RPL28-207ENST00000558815 MYBPHLA2RUH7 354 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 GABRDO14764 452 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 NPR3P17342 541 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 WARSP23381 471 aaKnown RBP16.38■□□□□ 0.21
RPL28-207ENST00000558815 FCARP24071 287 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 VIPR2P41587 438 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 NCOA4Q13772 614 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 DDR2Q16832 855 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 ZNF699Q32M78 642 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 ARHGAP15Q53QZ3 475 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 GPR158Q5T848 1215 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 SCARA5Q6ZMJ2 495 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 SCN4BQ8IWT1 228 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 ENGASEQ8NFI3 743 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 SPATA18Q8TC71 538 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 MYLPFQ96A32 169 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
RPL28-207ENST00000558815 ELSPBP1Q96BH3 223 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 MMRN2Q9H8L6 949 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 TBC1D17Q9HA65 648 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 RMND1Q9NWS8 449 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 CDH9Q9ULB4 789 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 TRAF3IP3Q9Y228 551 aa16.38■□□□□ 0.21
RPL28-207ENST00000558815 PI15O43692 258 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 SMC2O95347 1197 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 TRIM49P0CI25 452 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 TRIM49CP0CI26 452 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 GNL1P36915 607 aaPredicted RBP16.37■□□□□ 0.21
RPL28-207ENST00000558815 RAP1GAPP47736 663 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 CLCN5P51795 746 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 CYP27A1Q02318 531 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 VITQ6UXI7 678 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 GAREM2Q75VX8 874 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 FAM186BQ8IYM0 893 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 SMARCE1Q969G3 411 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 PKMYT1Q99640 499 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 KCNH6Q9H252 994 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 BRD9Q9H8M2 597 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 CRTAC1Q9NQ79 661 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.212e-7■■■■■ 33.6
RPL28-207ENST00000558815 ARIH1Q9Y4X5 557 aaPredicted RBP16.37■□□□□ 0.21
RPL28-207ENST00000558815 OBSL1O75147 1896 aa16.37■□□□□ 0.21
RPL28-207ENST00000558815 NUP210Q8TEM1 1887 aaPredicted RBP16.37■□□□□ 0.21
RPL28-207ENST00000558815 GADD45BO75293 160 aaPredicted RBP16.36■□□□□ 0.21
RPL28-207ENST00000558815 AKAP3O75969 853 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 FGF19O95750 216 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 C4BPAP04003 597 aaKnown RBP16.36■□□□□ 0.21
RPL28-207ENST00000558815 KRT13P13646 458 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 AOC1P19801 751 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
RPL28-207ENST00000558815 CDC25CP30307 473 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 GDI1P31150 447 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 ATICP31939 592 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 PIK3CAP42336 1068 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 VAMP7P51809 220 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 AP3M2P53677 418 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 RPL10AP62906 217 aaKnown RBP16.36■□□□□ 0.21
RPL28-207ENST00000558815 PFKPQ01813 784 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 MLF2Q15773 248 aaPredicted RBP16.36■□□□□ 0.21
RPL28-207ENST00000558815 ZNF667Q5HYK9 610 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 MDH1BQ5I0G3 518 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 ISM2Q6H9L7 571 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 C4orf50Q6ZRC1 276 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 LIMS2Q7Z4I7 341 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 TMC2Q8TDI7 906 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 EEF2KMTQ96G04 330 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 FOXQ1Q9C009 403 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 GPR88Q9GZN0 384 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 XYLT2Q9H1B5 865 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 SMYD3Q9H7B4 428 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 MAGEC2Q9UBF1 373 aaPredicted RBP16.36■□□□□ 0.21
RPL28-207ENST00000558815 HOOK1Q9UJC3 728 aaKnown RBP16.36■□□□□ 0.21
RPL28-207ENST00000558815 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
RPL28-207ENST00000558815 NME7Q9Y5B8 376 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 PCDHA5Q9Y5H7 936 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 TICRRQ7Z2Z1 1910 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 WDFY4Q6ZS81 3184 aa16.36■□□□□ 0.21
RPL28-207ENST00000558815 ZNF638Q14966 1978 aaKnown RBP16.35■□□□□ 0.21
RPL28-207ENST00000558815 HEPACAM2A8MVW5 462 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 A8MXQ7 604 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 KINO60870 393 aaKnown RBP16.35■□□□□ 0.21
RPL28-207ENST00000558815 VNN1O95497 513 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 CSH1P0DML2 217 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 CSH2P0DML3 217 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 BDNFP23560 247 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 PRCPP42785 496 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 PTPN5P54829 565 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 CDH8P55286 799 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 NHLH1Q02575 133 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 ADAM9Q13443 819 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 SLC44A4Q53GD3 710 aa16.35■□□□□ 0.21
RPL28-207ENST00000558815 ZNF658Q5TYW1 1059 aaPredicted RBP16.35■□□□□ 0.21
RPL28-207ENST00000558815 ARID3BQ8IVW6 561 aaPredicted RBP16.35■□□□□ 0.21
RPL28-207ENST00000558815 PRRX2Q99811 253 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms