RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 PNPLA4P41247 253 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 SHC2P98077 582 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 SMARCB1Q12824 385 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.42
CASC4-205ENST00000558735 SHC4Q6S5L8 630 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 TMEM150AQ86TG1 271 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
CASC4-205ENST00000558735 FAM200AQ8TCP9 573 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 SPPL2BQ8TCT7 592 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 C2orf15Q8WU43 125 aaKnown RBP12.4□□□□□ -0.42
CASC4-205ENST00000558735 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.42
CASC4-205ENST00000558735 ZNF396Q96N95 335 aaPredicted RBP12.4□□□□□ -0.42
CASC4-205ENST00000558735 TRIM9Q9C026 710 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 TASP1Q9H6P5 420 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 SEMA4GQ9NTN9 838 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 GDAP2Q9NXN4 497 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 RBAKQ9NYW8 714 aaPredicted RBP12.4□□□□□ -0.42
CASC4-205ENST00000558735 SIX4Q9UIU6 781 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 L1RE1Q9UN81 338 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.4□□□□□ -0.42
CASC4-205ENST00000558735 PIAS3Q9Y6X2 628 aa12.4□□□□□ -0.42
CASC4-205ENST00000558735 CACNA1GO43497 2377 aa12.4□□□□□ -0.43
CASC4-205ENST00000558735 CUTAO60888 179 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 F11P03951 625 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 CHRNB1P11230 501 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 WEE1P30291 646 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 HOXA6P31267 233 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 RBP5P82980 135 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 CYP4F8P98187 520 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 PRR23CQ6ZRP0 262 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 YAF2Q8IY57 180 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 GPD1LQ8N335 351 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 LRRC52Q8N7C0 313 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 NOC3LQ8WTT2 800 aaKnown RBP12.39□□□□□ -0.43
CASC4-205ENST00000558735 DHX58Q96C10 678 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 ZFYVE19Q96K21 471 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 ZNF560Q96MR9 790 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 ACBD6Q9BR61 282 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 PI4K2AQ9BTU6 479 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 LRRC27Q9C0I9 530 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 TNMDQ9H2S6 317 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 INTS13Q9NVM9 706 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 DDX43Q9NXZ2 648 aaKnown RBP12.39□□□□□ -0.43
CASC4-205ENST00000558735 OBP2AQ9NY56 170 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 ABI2Q9NYB9 513 aaPredicted RBP12.39□□□□□ -0.43
CASC4-205ENST00000558735 PCDHB5Q9Y5E4 795 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 LAMA1P25391 3075 aa12.39□□□□□ -0.43
CASC4-205ENST00000558735 COL4A2P08572 1712 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.38□□□□□ -0.43
CASC4-205ENST00000558735 ZNF233A6NK53 670 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 DPYSL4O14531 572 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 GABRDO14764 452 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 KIAA0391O15091 583 aaKnown RBP12.38□□□□□ -0.43
CASC4-205ENST00000558735 HUS1O60921 280 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 PRPF40AO75400 957 aaKnown RBP12.38□□□□□ -0.43
CASC4-205ENST00000558735 PRAMEF12O95522 483 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 YEATS4O95619 227 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 PMLP29590 882 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 SOX9P48436 509 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 GPR15P49685 360 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 LIMK1P53667 647 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 NLRP12P59046 1061 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 AMPD3Q01432 767 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 TSPY1Q01534 308 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 BFSP1Q12934 665 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 GAS6Q14393 721 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 VEPH1Q14D04 833 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 TAF12Q16514 161 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 SOWAHAQ2M3V2 549 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
CASC4-205ENST00000558735 ARHGAP15Q53QZ3 475 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 LMBRD2Q68DH5 695 aaPredicted RBP12.38□□□□□ -0.43
CASC4-205ENST00000558735 CNNM4Q6P4Q7 775 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
CASC4-205ENST00000558735 EPM2AIP1Q7L775 607 aaPredicted RBP12.38□□□□□ -0.43
CASC4-205ENST00000558735 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 CBWD2Q8IUF1 395 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 SPEM1Q8N4L4 309 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 IQUBQ8NA54 791 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 OR5B17Q8NGF7 314 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 TTC8Q8TAM2 541 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 CSGALNACT1Q8TDX6 532 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 MSANTD3Q96H12 275 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 PKMYT1Q99640 499 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 C7orf25Q9BPX7 421 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 CUEDC2Q9H467 287 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
CASC4-205ENST00000558735 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 GTF3C4Q9UKN8 822 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 ITGA11Q9UKX5 1188 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
CASC4-205ENST00000558735 PTPRJQ12913 1337 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 SPEGQ15772 3267 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 BAHCC1Q9P281 2608 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 MYBPHLA2RUH7 354 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 SLC38A8A6NNN8 435 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms