RNA–Protein interactions for RNA: ENST00000558555.5

MEIS3-204, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-204ENST00000558555 PPP1R2P3Q6NXS1 205 aa25.35■■□□□ 1.65
MEIS3-204ENST00000558555 PALB2Q86YC2 1186 aa25.35■■□□□ 1.65
MEIS3-204ENST00000558555 PASD1Q8IV76 773 aa25.35■■□□□ 1.65
MEIS3-204ENST00000558555 SYT15Q9BQS2 421 aa25.35■■□□□ 1.65
MEIS3-204ENST00000558555 O00370 1275 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 RTN2O75298 545 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 PTPN1P18031 435 aaKnown RBP25.34■■□□□ 1.65
MEIS3-204ENST00000558555 ACAT1P24752 427 aaKnown RBP25.34■■□□□ 1.65
MEIS3-204ENST00000558555 SSTR3P32745 418 aaPredicted RBP25.34■■□□□ 1.65
MEIS3-204ENST00000558555 C12orf29Q8N999 325 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 COLGALT1Q8NBJ5 622 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 TMEM35BQ8NCS4 154 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 IGSF21Q96ID5 467 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 GPR62Q9BZJ7 368 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 FAM49BQ9NUQ9 324 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.34■■□□□ 1.65
MEIS3-204ENST00000558555 CDH23Q9H251 3354 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 TLL1O43897 1013 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 H2AFZP0C0S5 128 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 PSMC1P62191 440 aaKnown RBP25.34■■□□□ 1.65
MEIS3-204ENST00000558555 LCLAT1Q6UWP7 414 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.34■■□□□ 1.65
MEIS3-204ENST00000558555 H2AFVQ71UI9 128 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 CEP57Q86XR8 500 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 CYFIP2Q96F07 1278 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 PPP1R13BQ96KQ4 1090 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 ACBD6Q9BR61 282 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 HESX1Q9UBX0 185 aa25.34■■□□□ 1.65
MEIS3-204ENST00000558555 CYP1A1P04798 512 aaPredicted RBP25.33■■□□□ 1.65
MEIS3-204ENST00000558555 CFHP08603 1231 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 NSFP46459 744 aaKnown RBP25.33■■□□□ 1.65
MEIS3-204ENST00000558555 TSPY1Q01534 308 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 KIF5AQ12840 1032 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 ARHGAP29Q52LW3 1261 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 RASIP1Q5U651 963 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 NAA35Q5VZE5 725 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 ARHGAP17Q68EM7 881 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 ACAD10Q6JQN1 1059 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 TMEM173Q86WV6 379 aaPredicted RBP25.33■■□□□ 1.65
MEIS3-204ENST00000558555 TMEM169Q96HH4 297 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 TSGA10Q9BZW7 698 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 ZNF518BQ9C0D4 1074 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 LHX5Q9H2C1 402 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 TAS2R14Q9NYV8 317 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 SPG21Q9NZD8 308 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 INTUQ9ULD6 942 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 PCDHB12Q9Y5F1 795 aa25.33■■□□□ 1.65
MEIS3-204ENST00000558555 KIAA1671Q9BY89 1806 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 USP27XA6NNY8 438 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 M0QYV0 167 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 MICAL2O94851 1124 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 OAZ2O95190 189 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 FTLP02792 175 aaPredicted RBP25.32■■□□□ 1.64
MEIS3-204ENST00000558555 FGFR3P22607 806 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 PPM1AP35813 382 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 GOLGA7BQ2TAP0 167 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 LRIT3Q3SXY7 679 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 PPP1R26Q5T8A7 1209 aaPredicted RBP25.32■■□□□ 1.64
MEIS3-204ENST00000558555 REXO1L1PQ8IX06 675 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 BCL7CQ8WUZ0 217 aaPredicted RBP25.32■■□□□ 1.64
MEIS3-204ENST00000558555 RNPC3Q96LT9 517 aaKnown RBP25.32■■□□□ 1.64
MEIS3-204ENST00000558555 ISCUQ9H1K1 167 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 TSPAN16Q9UKR8 245 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 ATP8B3O60423 1300 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 VWA8A3KMH1 1905 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 ATP2C2O75185 946 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 UNGP13051 313 aaPredicted RBP25.32■■□□□ 1.64
MEIS3-204ENST00000558555 NOMO3P69849 1222 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 MDH1BQ5I0G3 518 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 VARS2Q5ST30 1063 aaKnown RBP25.32■■□□□ 1.64
MEIS3-204ENST00000558555 DENND1BQ6P3S1 775 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 SLC39A11Q8N1S5 342 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 CPA5Q8WXQ8 436 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 RTP3Q9BQQ7 232 aa25.32■■□□□ 1.64
MEIS3-204ENST00000558555 KRT86O43790 486 aa25.31■■□□□ 1.64
MEIS3-204ENST00000558555 CENPCQ03188 943 aa25.31■■□□□ 1.64
MEIS3-204ENST00000558555 LPIN3Q9BQK8 851 aa25.31■■□□□ 1.64
MEIS3-204ENST00000558555 TTPALQ9BTX7 342 aa25.31■■□□□ 1.64
MEIS3-204ENST00000558555 LZTFL1Q9NQ48 299 aa25.31■■□□□ 1.64
MEIS3-204ENST00000558555 ANKRD62A6NC57 917 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 H7C4K7 107 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 CCDC130P13994 396 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 CDH5P33151 784 aaPredicted RBP25.3■■□□□ 1.64
MEIS3-204ENST00000558555 GALCP54803 685 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 MAPRE1Q15691 268 aaKnown RBP25.3■■□□□ 1.64
MEIS3-204ENST00000558555 USP41Q3LFD5 358 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 INTS6LQ5JSJ4 861 aaKnown RBP25.3■■□□□ 1.64
MEIS3-204ENST00000558555 ZNF280DQ6N043 979 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 ZNF662Q6ZS27 426 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 SP7Q8TDD2 431 aaPredicted RBP25.3■■□□□ 1.64
MEIS3-204ENST00000558555 CTNNBL1Q8WYA6 563 aaPredicted RBP25.3■■□□□ 1.64
MEIS3-204ENST00000558555 NOX5Q96PH1 765 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 MED10Q9BTT4 135 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 PACSIN1Q9BY11 444 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 CRTAC1Q9NQ79 661 aa25.3■■□□□ 1.64
MEIS3-204ENST00000558555 PJA2O43164 708 aa25.29■■□□□ 1.64
MEIS3-204ENST00000558555 ADORA2BP29275 332 aa25.29■■□□□ 1.64
MEIS3-204ENST00000558555 CTXN3Q4LDR2 81 aa25.29■■□□□ 1.64
MEIS3-204ENST00000558555 KIAA0319Q5VV43 1072 aa25.29■■□□□ 1.64
MEIS3-204ENST00000558555 MSANTD4Q8NCY6 345 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms