RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 ARPP19P56211 112 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 BPIFB4P59827 614 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 ERVFC1P60507 584 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 TSPY1Q01534 308 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 UBE3AQ05086 875 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 PTK2Q05397 1052 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 MRPL58Q14197 206 aaKnown RBP10.23□□□□□ -0.77
CUX1-216ENST00000558469 BMS1Q14692 1282 aaKnown RBP10.23□□□□□ -0.77
CUX1-216ENST00000558469 PSMD5Q16401 504 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 ASIC2Q16515 512 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 E4F1Q66K89 784 aaPredicted RBP10.23□□□□□ -0.77
CUX1-216ENST00000558469 ZNF280DQ6N043 979 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 IRF2BP2Q7Z5L9 587 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 SLC47A2Q86VL8 602 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 FMNL3Q8IVF7 1028 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 GLYCTKQ8IVS8 523 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 CRYBG2Q8N1P7 616 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 C12orf29Q8N999 325 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 B3GALNT2Q8NCR0 500 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 OR10T2Q8NGX3 314 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 PIK3R5Q8WYR1 880 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 SYN2Q92777 582 aaPredicted RBP10.23□□□□□ -0.77
CUX1-216ENST00000558469 PDLIM2Q96JY6 352 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 TNIP3Q96KP6 325 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 TMEM209Q96SK2 561 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 DNAJC7Q99615 494 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 TCF25Q9BQ70 676 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 SYT15Q9BQS2 421 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 ENTPD7Q9NQZ7 604 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 TLR9Q9NR96 1032 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 MRPL17Q9NRX2 175 aaKnown RBP10.23□□□□□ -0.77
CUX1-216ENST00000558469 ABHD10Q9NUJ1 306 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 ZNHIT6Q9NWK9 470 aaKnown RBP10.23□□□□□ -0.77
CUX1-216ENST00000558469 AIPL1Q9NZN9 384 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 GTF3C4Q9UKN8 822 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 CDH9Q9ULB4 789 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 SSX2IPQ9Y2D8 614 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 TRIOBPQ9H2D6 2365 aa10.23□□□□□ -0.77
CUX1-216ENST00000558469 MYO7AQ13402 2215 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 EPOPA6NHQ4 379 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 OR6C75A6NL08 312 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 THAP12O43422 761 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 TBC1D4O60343 1298 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 PAEPP09466 180 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 OR4Q2P0C623 313 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 CTSAP10619 480 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 SKILP12757 684 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 GNA15P30679 374 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 OR1D2P34982 312 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 PDE6CP51160 858 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 GSDMDP57764 484 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 KLHL30Q0D2K2 578 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 ARID5BQ14865 1188 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 CCDC142Q17RM4 750 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 SLC39A12Q504Y0 691 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 SGO2Q562F6 1265 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 MDH1BQ5I0G3 518 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 INTS6LQ5JSJ4 861 aaKnown RBP10.22□□□□□ -0.77
CUX1-216ENST00000558469 PLPP4Q5VZY2 271 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 RSPO2Q6UXX9 243 aaPredicted RBP10.22□□□□□ -0.77
CUX1-216ENST00000558469 CCDC186Q7Z3E2 898 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 LRRTM3Q86VH5 581 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 MICAL1Q8TDZ2 1067 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 GDPD5Q8WTR4 605 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 TFAP2BQ92481 460 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 PANX2Q96RD6 677 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 CLSTN3Q9BQT9 956 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 OXCT2Q9BYC2 517 aaPredicted RBP10.22□□□□□ -0.77
CUX1-216ENST00000558469 ZNF576Q9H609 170 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 HAUS4Q9H6D7 363 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 CRTAC1Q9NQ79 661 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 FAM49BQ9NUQ9 324 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 MTRRQ9UBK8 725 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 KIAA1257Q9ULG3 409 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 CDY1Q9Y6F8 540 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 GREB1Q4ZG55 1949 aa10.22□□□□□ -0.77
CUX1-216ENST00000558469 ZNF638Q14966 1978 aaKnown RBP10.22□□□□□ -0.77
CUX1-216ENST00000558469 PATJQ8NI35 1801 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.21□□□□□ -0.77
CUX1-216ENST00000558469 MYBPHLA2RUH7 354 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 RFXAPO00287 272 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 ADAM12O43184 909 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 LPXNO60711 386 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 LILRB3O75022 631 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 SERPING1P05155 500 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 PTMAP06454 111 aaKnown RBP10.21□□□□□ -0.77
CUX1-216ENST00000558469 VDRP11473 427 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 CCDC130P13994 396 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 CPB1P15086 417 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 CYP11B1P15538 503 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 BRD2P25440 801 aaKnown RBP10.21□□□□□ -0.77
CUX1-216ENST00000558469 ADORA2BP29275 332 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 HNRNPH3P31942 346 aaKnown RBP10.21□□□□□ -0.77
CUX1-216ENST00000558469 SSTR3P32745 418 aaPredicted RBP10.21□□□□□ -0.77
CUX1-216ENST00000558469 CYP27A1Q02318 531 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 CREMQ03060 361 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 CCDC173Q0VFZ6 552 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 CAMK1Q14012 370 aa10.21□□□□□ -0.77
CUX1-216ENST00000558469 SMC1AQ14683 1233 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms