RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 CD302Q8IX05 232 aa19.27■□□□□ 0.68
TSPAN3-204ENST00000558394 DEFB124Q8NES8 71 aa19.27■□□□□ 0.68
TSPAN3-204ENST00000558394 ECT2Q9H8V3 914 aa19.27■□□□□ 0.68
TSPAN3-204ENST00000558394 DUS2Q9NX74 493 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-204ENST00000558394 MAGED2Q9UNF1 606 aaPredicted RBP19.27■□□□□ 0.68
TSPAN3-204ENST00000558394 ZFYVE26Q68DK2 2539 aa19.27■□□□□ 0.68
TSPAN3-204ENST00000558394 TCHHQ07283 1943 aa19.27■□□□□ 0.67
TSPAN3-204ENST00000558394 SOBPA7XYQ1 873 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 PPEF2O14830 753 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 CYP11A1P05108 521 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 HAPLN1P10915 354 aaPredicted RBP19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 RDXP35241 583 aaKnown RBP19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 ANAPC15P60006 121 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 RING1Q06587 406 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 LMAN2Q12907 356 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 MTF1Q14872 753 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 C9orf57Q5W0N0 161 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 KIAA1211LQ6NV74 962 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 MON1AQ86VX9 555 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 DCP1BQ8IZD4 617 aaKnown RBP19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 IGSF22Q8N9C0 903 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 PIGKQ92643 395 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 ATP2A3Q93084 1043 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 TPSD1Q9BZJ3 242 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 TBX20Q9UMR3 447 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 SPEGQ15772 3267 aa19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 FASNP49327 2511 aaKnown RBP19.26■□□□□ 0.67
TSPAN3-204ENST00000558394 TSC2P49815 1807 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 ZZEF1O43149 2961 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 MYO16Q9Y6X6 1858 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 PATE3B3GLJ2 98 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 CDX4O14627 284 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 HNRNPDLO14979 420 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 OGTO15294 1046 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 F11P03951 625 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 CSH1P0DML2 217 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 CSH2P0DML3 217 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 IRX4P78413 519 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 ZNF268Q14587 947 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 ENOX2Q16206 610 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 JADE1Q6IE81 842 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 TTC30AQ86WT1 665 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 PYM1Q9BRP8 204 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 NUSAP1Q9BXS6 441 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 HAPLN2Q9GZV7 340 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 LARSQ9P2J5 1176 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 UXTQ9UBK9 157 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 NEUROG3Q9Y4Z2 214 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 PCDHB5Q9Y5E4 795 aa19.25■□□□□ 0.67
TSPAN3-204ENST00000558394 ASCC3Q8N3C0 2202 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 PP2D1A8MPX8 630 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 CYB561D2O14569 222 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 NBR1Q14596 966 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 TMEM132DQ14C87 1099 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 NAIF1Q69YI7 327 aaPredicted RBP19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 ANO7Q6IWH7 933 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 TMEM150AQ86TG1 271 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 C4orf32Q8N8J7 132 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 OSCP1Q8WVF1 389 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 OBSL1O75147 1896 aa19.24■□□□□ 0.67
TSPAN3-204ENST00000558394 KIAA1549LQ6ZVL6 1849 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 PIRO00625 290 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 HYAL3O43820 417 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 PRPF40AO75400 957 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 ALDH1A2O94788 518 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 CDC25AP30304 524 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 TAF6P49848 677 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 TSPY1Q01534 308 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 FAM160A1Q05DH4 1040 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 TRIM61Q5EBN2 209 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 DTHD1Q6ZMT9 781 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 MSTO1Q9BUK6 570 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 TRPC7Q9HCX4 862 aa19.23■□□□□ 0.67
TSPAN3-204ENST00000558394 SCN1AP35498 2009 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 TRAV19A0A0A6YYK7 116 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 LAD1O00515 517 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 MAP3K13O43283 966 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 CKMP06732 381 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 HMGA1P17096 107 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 MAPK8P45983 427 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 SEC13P55735 322 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 C2orf27AQ580R0 203 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 LMBRD2Q68DH5 695 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 LPCAT2Q7L5N7 544 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 KCNK18Q7Z418 384 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 LRRTM3Q86VH5 581 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 CDK5RAP3Q96JB5 506 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 SPACA7Q96KW9 195 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 CNOT6LQ96LI5 555 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 KCND2Q9NZV8 630 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 EVLQ9UI08 416 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 DERAQ9Y315 318 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 MSRB2Q9Y3D2 182 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 WNT6Q9Y6F9 365 aa19.22■□□□□ 0.67
TSPAN3-204ENST00000558394 NFICP08651 508 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 USP17L7P0C7H9 530 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 BCKDHBP21953 392 aa19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 ATXN3P54252 364 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-204ENST00000558394 NFE2Q16621 373 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms