RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 CCDC39Q9UFE4 941 aa23.75■■□□□ 1.39
SPG21-205ENST00000558339 DCDC2BA2VCK2 349 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 ITGB3P05106 788 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 GAP43P17677 238 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 CNR2P34972 360 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 TFAMQ00059 246 aaKnown RBP23.74■■□□□ 1.39
SPG21-205ENST00000558339 CCDC142Q17RM4 750 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 RRAGBQ5VZM2 374 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 TRIM68Q6AZZ1 485 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 SYNPOQ8N3V7 929 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 PKMYT1Q99640 499 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 RTKNQ9BST9 563 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 UPF2Q9HAU5 1272 aaKnown RBP23.74■■□□□ 1.39
SPG21-205ENST00000558339 THG1LQ9NWX6 298 aaKnown RBP23.74■■□□□ 1.39
SPG21-205ENST00000558339 AGAP1Q9UPQ3 857 aa23.74■■□□□ 1.39
SPG21-205ENST00000558339 A0A087X0B3 334 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 EXTL3O43909 919 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 LRP3O75074 770 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 TADA3O75528 432 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 GCNT3O95395 438 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 HOXA6P31267 233 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 PNPLA4P41247 253 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 TXNDC8Q6A555 127 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 SV2BQ7L1I2 683 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 OSTM1Q86WC4 334 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 LEO1Q8WVC0 666 aaPredicted RBP23.73■■□□□ 1.39
SPG21-205ENST00000558339 OLFML3Q9NRN5 406 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 SEMA4GQ9NTN9 838 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 ZMYM5Q9UJ78 669 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 EXOC7Q9UPT5 735 aa23.73■■□□□ 1.39
SPG21-205ENST00000558339 TCHHQ07283 1943 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 FRMD3A2A2Y4 597 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 GOLGA8IPA6NC78 632 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 GOLGA8JA6NMD2 632 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 HCRTO43612 131 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 PRPF40AO75400 957 aaKnown RBP23.72■■□□□ 1.39
SPG21-205ENST00000558339 ACAT1P24752 427 aaKnown RBP23.72■■□□□ 1.39
SPG21-205ENST00000558339 AVPR1AP37288 418 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 TSPY1Q01534 308 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 RUNX3Q13761 415 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 DDR2Q16832 855 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 TMEM196Q5HYL7 178 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 FSTL4Q6MZW2 842 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 WDR5BQ86VZ2 330 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 ACBD6Q9BR61 282 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 CBWD1Q9BRT8 395 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 EBF3Q9H4W6 596 aa23.72■■□□□ 1.39
SPG21-205ENST00000558339 DDX43Q9NXZ2 648 aaKnown RBP23.72■■□□□ 1.39
SPG21-205ENST00000558339 RBAKQ9NYW8 714 aaPredicted RBP23.72■■□□□ 1.39
SPG21-205ENST00000558339 MAGED2Q9UNF1 606 aaPredicted RBP23.72■■□□□ 1.39
SPG21-205ENST00000558339 CSH1P0DML2 217 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 CSH2P0DML3 217 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 ARSAP15289 507 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 GARTP22102 1010 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 CYP2F1P24903 491 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 DDX6P26196 483 aaKnown RBP eCLIP23.71■■□□□ 1.39
SPG21-205ENST00000558339 CEBPZQ03701 1054 aaKnown RBP23.71■■□□□ 1.39
SPG21-205ENST00000558339 NFE2Q16621 373 aaPredicted RBP23.71■■□□□ 1.39
SPG21-205ENST00000558339 INTS6LQ5JSJ4 861 aaKnown RBP23.71■■□□□ 1.39
SPG21-205ENST00000558339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.71■■□□□ 1.39
SPG21-205ENST00000558339 MON1AQ86VX9 555 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 LRRC52Q8N7C0 313 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 TDP1Q9NUW8 608 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 SIX4Q9UIU6 781 aa23.71■■□□□ 1.39
SPG21-205ENST00000558339 TULP1O00294 542 aaPredicted RBP23.7■■□□□ 1.38
SPG21-205ENST00000558339 NOL4O94818 638 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 BFSP1Q12934 665 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 CSRP2Q16527 193 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 PRR23CQ6ZRP0 262 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 FAM160A2Q8N612 972 aaPredicted RBP23.7■■□□□ 1.38
SPG21-205ENST00000558339 PANK2Q9BZ23 570 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 PCIF1Q9H4Z3 704 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 KIF9Q9HAQ2 790 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 FBRSL1Q9HCM7 1045 aaKnown RBP23.7■■□□□ 1.38
SPG21-205ENST00000558339 PDE11AQ9HCR9 933 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 GDAP2Q9NXN4 497 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 GTF3C4Q9UKN8 822 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 PCDHB13Q9Y5F0 798 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 DENND4CQ5VZ89 1909 aa23.7■■□□□ 1.38
SPG21-205ENST00000558339 OBSL1O75147 1896 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 SOBPA7XYQ1 873 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 TRDMT1O14717 391 aaKnown RBP23.69■■□□□ 1.38
SPG21-205ENST00000558339 SLC30A4O14863 429 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 HUS1O60921 280 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 LDHAP00338 332 aaKnown RBP23.69■■□□□ 1.38
SPG21-205ENST00000558339 IDEP14735 1019 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 SYT1P21579 422 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 PXNP49023 591 aaPredicted RBP23.69■■□□□ 1.38
SPG21-205ENST00000558339 NAIF1Q69YI7 327 aaPredicted RBP23.69■■□□□ 1.38
SPG21-205ENST00000558339 TMEM86AQ8N2M4 240 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 CSGALNACT2Q8N6G5 542 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 NETO1Q8TDF5 533 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 CACTINQ8WUQ7 758 aaKnown RBP23.69■■□□□ 1.38
SPG21-205ENST00000558339 MRPS31Q92665 395 aaKnown RBP23.69■■□□□ 1.38
SPG21-205ENST00000558339 MTMR12Q9C0I1 747 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 ABCB6Q9NP58 842 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 POLR3BQ9NW08 1133 aaPredicted RBP23.69■■□□□ 1.38
SPG21-205ENST00000558339 ITGA11Q9UKX5 1188 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 SNX9Q9Y5X1 595 aa23.69■■□□□ 1.38
SPG21-205ENST00000558339 PTPRJQ12913 1337 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms