RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 DEFB128Q7Z7B8 93 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 ZNF280BQ86YH2 543 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 TOP6BLQ8N6T0 577 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 CEP112Q8N8E3 955 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 PAWRQ96IZ0 340 aaKnown RBP21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 PIK3R2O00459 728 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 RPL9P32969 192 aaKnown RBP21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 GPD2P43304 727 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 RNASE9P60153 205 aaKnown RBP21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 TUSC3Q13454 348 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 TIGD5Q53EQ6 642 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 DAB2IPQ5VWQ8 1189 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 C11orf63Q6NUN7 778 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 LCLAT1Q6UWP7 414 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 HES6Q96HZ4 224 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 KIAA1257Q9ULG3 409 aa21.62■■□□□ 1.05
SNRPA1-205ENST00000558036 TULP2O00295 520 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 ITGB1P05556 798 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 RPL7AP62424 266 aaKnown RBP21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 PLEKHA7Q6IQ23 1121 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 DSTYKQ6XUX3 929 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 TTC30AQ86WT1 665 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 SEPT8Q92599 483 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 EPC1Q9H2F5 836 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 DDHD2O94830 711 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 ERBB2P04626 1255 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 CALB1P05937 261 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 PFKMP08237 780 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 HSPA1AP0DMV8 641 aaKnown RBP21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 HSPA1BP0DMV9 641 aaKnown RBP21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 BRCC3P46736 316 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 MARCKSL1P49006 195 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 GATMP50440 423 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 PDCLQ13371 301 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 ELF2Q15723 593 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 TEX35Q5T0J7 233 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 ST7Q9NRC1 585 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 PARVAQ9NVD7 372 aa21.61■■□□□ 1.05
SNRPA1-205ENST00000558036 TET1Q8NFU7 2136 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 CTAGE15A4D2H0 777 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 CTAGE8P0CG41 777 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 WARSP23381 471 aaKnown RBP21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 ADORA2BP29275 332 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 NOMO2Q5JPE7 1267 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 CTAGE6Q86UF2 777 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 CTAGE4Q8IX94 777 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 KRT35Q92764 455 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 TOX2Q96NM4 488 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 SYNCQ9H7C4 482 aa21.6■■□□□ 1.05
SNRPA1-205ENST00000558036 EFCAB8A8MWE9 144 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 GOLGA8SH3BPF8 625 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 KIAA0319Q5VV43 1072 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 PPP1R2P3Q6NXS1 205 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 CD300LGQ6UXG3 332 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 CRYBG2Q8N1P7 616 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 NOA1Q8NC60 698 aaKnown RBP21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 MCEEQ96PE7 176 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 MRPL47Q9HD33 250 aaKnown RBP21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 TMEM161AQ9NX61 479 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 INPPL1O15357 1258 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 DDX3YO15523 660 aaKnown RBP21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 RGS7P49802 495 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 LRRC26Q2I0M4 334 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 CCDC181Q5TID7 509 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 DNAJC24Q6P3W2 148 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 SLC2A14Q8TDB8 520 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 UBXN4Q92575 508 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 ALG3Q92685 438 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 TBC1D13Q9NVG8 400 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 DDX43Q9NXZ2 648 aaKnown RBP21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 SCINQ9Y6U3 715 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 SCN5AQ14524 2016 aa21.59■■□□□ 1.05
SNRPA1-205ENST00000558036 TCRBV5S1A1TA0A578 114 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 MYO1FO00160 1098 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 SPOPO43791 374 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 RNASELQ05823 741 aaKnown RBP21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 PKN2Q16513 984 aaKnown RBP21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 DCAF12L1Q5VU92 463 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 B3GALNT2Q8NCR0 500 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 C18orf8Q96DM3 657 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 CALR3Q96L12 384 aaKnown RBP21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 TMEM39AQ9NV64 488 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 DNAJB4Q9UDY4 337 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 TBX21Q9UL17 535 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 PCDHB7Q9Y5E2 793 aa21.58■■□□□ 1.05
SNRPA1-205ENST00000558036 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 GABRDO14764 452 aa21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 AARSP49588 968 aaKnown RBP eCLIP21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 CTCFP49711 727 aaPredicted RBP21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 PKDCCQ504Y2 493 aa21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 C1orf53Q5VUE5 145 aa21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 PMF1Q6P1K2 205 aa21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 RSRC2Q7L4I2 434 aaKnown RBP21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 FEZF2Q8TBJ5 459 aa21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 URGCPQ8TCY9 931 aa21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 DDX27Q96GQ7 796 aaKnown RBP21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 C11orf49Q9H6J7 331 aa21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 HCSTQ9UBK5 93 aa21.58■■□□□ 1.04
SNRPA1-205ENST00000558036 KIAA0100Q14667 2235 aaKnown RBP21.57■■□□□ 1.04
SNRPA1-205ENST00000558036 CEP104O60308 925 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms