RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 WRNIP1Q96S55 665 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 REEP2Q9BRK0 252 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CPEB1Q9BZB8 566 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 ARHGAP39Q9C0H5 1083 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 BRD8Q9H0E9 1235 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 SIK2Q9H0K1 926 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 RNPEPQ9H4A4 650 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 RETREG1Q9H6L5 497 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 SYNCQ9H7C4 482 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CHODLQ9H9P2 273 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ZCCHC17Q9NP64 241 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 EIF2B3Q9NR50 452 aaKnown RBP4.25□□□□□ -1.73
TDP1-217ENST00000557782 TMOD4Q9NZQ9 345 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 GIMAP2Q9UG22 337 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 ZFP69BQ9UJL9 534 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CAPN11Q9UMQ6 739 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 CYP46A1Q9Y6A2 500 aa4.25□□□□□ -1.73
TDP1-217ENST00000557782 RSF1Q96T23 1441 aaPredicted RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 CCDC78A2IDD5 438 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 AQP7P3A6NL99 342 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 EFCAB8A8MWE9 144 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 NUDT19A8MXV4 375 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 M0QYG6 137 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 PCDH17O14917 1159 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 DNAJB5O75953 348 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 KRT38O76015 456 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 NTSR2O95665 410 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 IL18BPO95998 194 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 IGLV1-40P01703 118 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 MPOP05164 745 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 SRGAP2BP0DMP2 458 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 HSPA1AP0DMV8 641 aaKnown RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 HSPA1BP0DMV9 641 aaKnown RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 RAP2AP10114 183 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 CKBP12277 381 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 FOSL1P15407 271 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 COL8A1P27658 744 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 OAS2P29728 719 aaKnown RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 AKT1P31749 480 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 ATICP31939 592 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 HOXD13P35453 343 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 ACTN2P35609 894 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 ADCY8P40145 1251 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 WNT3P56703 355 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 PRR5P85299 388 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 PLIN5Q00G26 463 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 PTH1RQ03431 593 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 TMEM62Q0P6H9 643 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 SMAD1Q15797 465 aaKnown RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 BAK1Q16611 211 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 INSCQ1MX18 579 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 TBC1D10BQ4KMP7 808 aaPredicted RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 CTXN3Q4LDR2 81 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 PLAG1Q6DJT9 500 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 CD300LDQ6UXZ3 194 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 TTC30AQ86WT1 665 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 SNX32Q86XE0 403 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 CCDC191Q8NCU4 936 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 REPS2Q8NFH8 660 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 NLGN4YQ8NFZ3 816 aaPredicted RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 RAPGEF4Q8WZA2 1011 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 GRAMD1AQ96CP6 724 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 VMP1Q96GC9 406 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 TXLNGYQ9BZA5 131 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 ABHD16BQ9H3Z7 469 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 ZBTB26Q9HCK0 441 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 G6PC2Q9NQR9 355 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 MRGBPQ9NV56 204 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 NDUFAF4Q9P032 175 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 PIM2Q9P1W9 311 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 XPR1Q9UBH6 696 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 ADD3Q9UEY8 706 aaKnown RBP4.24□□□□□ -1.73
TDP1-217ENST00000557782 VWA7Q9Y334 891 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 LMTK3Q96Q04 1460 aa4.24□□□□□ -1.73
TDP1-217ENST00000557782 CNTNAP5Q8WYK1 1306 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 ZNF785A8K8V0 405 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 E7EVH7 732 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 MASP2O00187 686 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 KIAA0391O15091 583 aaKnown RBP4.23□□□□□ -1.73
TDP1-217ENST00000557782 MTSS1O43312 755 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 DYRK3O43781 588 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 CCNT2O60583 730 aaKnown RBP4.23□□□□□ -1.73
TDP1-217ENST00000557782 PTP4A3O75365 173 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 SLC43A1O75387 559 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 TSPAN9O75954 239 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 WFS1O76024 890 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 CHEK2O96017 543 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 VIPP01282 170 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 TFRCP02786 760 aaKnown RBP4.23□□□□□ -1.73
TDP1-217ENST00000557782 HPXP02790 462 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 ANXA6P08133 673 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 SBK3P0C264 359 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 CYP2C9P11712 490 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 RAC2P15153 192 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 PFKLP17858 780 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 MST1P26927 711 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 ABCD3P28288 659 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 SLC5A2P31639 672 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 PGM1P36871 562 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms