RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZNF687Q8N1G0 1237 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 CXorf38Q8TB03 319 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
SNX6-210ENST00000557341 FAM84AQ96KN4 292 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 ACBD6Q9BR61 282 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 TMLHEQ9NVH6 421 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 SNX9Q9Y5X1 595 aa15.23■□□□□ 0.03
SNX6-210ENST00000557341 PTPRJQ12913 1337 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 SLC38A8A6NNN8 435 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 F13A1P00488 732 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 TNNC2P02585 160 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 ZSCAN22P10073 491 aaPredicted RBP15.22■□□□□ 0.03
SNX6-210ENST00000557341 CCNE1P24864 410 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 KPNA1P52294 538 aaPredicted RBP15.22■□□□□ 0.03
SNX6-210ENST00000557341 MYO1EQ12965 1108 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 PPP2R5DQ14738 602 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 LMBRD2Q68DH5 695 aaPredicted RBP15.22■□□□□ 0.03
SNX6-210ENST00000557341 CBWD2Q8IUF1 395 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 GPIHBP1Q8IV16 184 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 TOP6BLQ8N6T0 577 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 BPIFB1Q8TDL5 484 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 ATRIPQ8WXE1 791 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 PI4K2AQ9BTU6 479 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 C8orf33Q9H7E9 229 aaPredicted RBP15.22■□□□□ 0.03
SNX6-210ENST00000557341 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 ABCB6Q9NP58 842 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 INTS13Q9NVM9 706 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 ZSCAN32Q9NX65 697 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 HSPBP1Q9NZL4 362 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 SIX4Q9UIU6 781 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 EML5Q05BV3 1969 aa15.22■□□□□ 0.03
SNX6-210ENST00000557341 SPAG17Q6Q759 2223 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 PRPF40AO75400 957 aaKnown RBP15.21■□□□□ 0.03
SNX6-210ENST00000557341 CSH1P0DML2 217 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 CSH2P0DML3 217 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 ACAT1P24752 427 aaKnown RBP15.21■□□□□ 0.03
SNX6-210ENST00000557341 DDX6P26196 483 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNX6-210ENST00000557341 PCSK1P29120 753 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 CTHP32929 405 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 LHX1P48742 406 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 CCR3P51677 355 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 RPL10AP62906 217 aaKnown RBP15.21■□□□□ 0.03
SNX6-210ENST00000557341 PLCB2Q00722 1185 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 LRRC32Q14392 662 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 FOXD4L6Q3SYB3 417 aaPredicted RBP15.21■□□□□ 0.03
SNX6-210ENST00000557341 TSSK4Q6SA08 328 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 FOXD4L3Q6VB84 417 aaPredicted RBP15.21■□□□□ 0.03
SNX6-210ENST00000557341 UNC13DQ70J99 1090 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 EPM2AIP1Q7L775 607 aaPredicted RBP15.21■□□□□ 0.03
SNX6-210ENST00000557341 WDR49Q8IV35 697 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 CELF5Q8N6W0 485 aaKnown RBP15.21■□□□□ 0.03
SNX6-210ENST00000557341 ZBTB44Q8NCP5 570 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 RUBCNQ92622 972 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 ZFYVE19Q96K21 471 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 C7orf25Q9BPX7 421 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 FAM126AQ9BYI3 521 aaPredicted RBP15.21■□□□□ 0.03
SNX6-210ENST00000557341 LMAN1LQ9HAT1 526 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 FAM13BQ9NYF5 915 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 DNAH14Q0VDD8 3507 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 ATG2BQ96BY7 2078 aa15.21■□□□□ 0.03
SNX6-210ENST00000557341 MYBPHLA2RUH7 354 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 SPECC1L-ADORA2AF8WAN1 911 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 POLR2DO15514 142 aaKnown RBP15.2■□□□□ 0.02
SNX6-210ENST00000557341 CHRNB1P11230 501 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 HMGA1P17096 107 aaKnown RBP15.2■□□□□ 0.02
SNX6-210ENST00000557341 HOXD13P35453 343 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 AVPR1AP37288 418 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 ME1P48163 572 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 SOX9P48436 509 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 GPR15P49685 360 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 NLRP12P59046 1061 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
SNX6-210ENST00000557341 DUOXA2Q1HG44 320 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 MAMSTRQ6ZN01 415 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 DPH6Q7L8W6 267 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 TMEM150AQ86TG1 271 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 OSTM1Q86WC4 334 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 RALGPS2Q86X27 583 aaPredicted RBP15.2■□□□□ 0.02
SNX6-210ENST00000557341 CMTM8Q8IZV2 173 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 SUMF1Q8NBK3 374 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 STKLD1Q8NE28 680 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 OR5B17Q8NGF7 314 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 MRPS31Q92665 395 aaKnown RBP15.2■□□□□ 0.02
SNX6-210ENST00000557341 NELL1Q92832 810 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 FUBP3Q96I24 572 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNX6-210ENST00000557341 HPDLQ96IR7 371 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 LRRC3BQ96PB8 259 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 PKMYT1Q99640 499 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 KIF9Q9HAQ2 790 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 AGPAT3Q9NRZ7 376 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 THG1LQ9NWX6 298 aaKnown RBP15.2■□□□□ 0.02
SNX6-210ENST00000557341 GTSE1Q9NYZ3 720 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 UXTQ9UBK9 157 aaPredicted RBP15.2■□□□□ 0.02
SNX6-210ENST00000557341 GTF3C4Q9UKN8 822 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 MAGED2Q9UNF1 606 aaPredicted RBP15.2■□□□□ 0.02
SNX6-210ENST00000557341 CACNA1AO00555 2505 aa15.2■□□□□ 0.02
SNX6-210ENST00000557341 GABRDO14764 452 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms