RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 NPY2RP49146 381 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 CENPIQ92674 756 aaPredicted RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 AMACRQ9UHK6 382 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 UHRF1BP1LA0JNW5 1464 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 MYO3BQ8WXR4 1341 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 NCAM1P13591 858 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 GNA15P30679 374 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 RNPC3Q96LT9 517 aaKnown RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MAST1Q9Y2H9 1570 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 RTN2O75298 545 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 PLA2G4BP0C869 781 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 CORO7P57737 925 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ALDH6A1Q02252 535 aaKnown RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF57Q68EA5 555 aaPredicted RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 KCNV1Q6PIU1 500 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ERO1BQ86YB8 467 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 RTKN2Q8IZC4 609 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 IFNL3Q8IZI9 196 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MYLPFQ96A32 169 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MIEF2Q96C03 454 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 OPLAHO14841 1288 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 KPNA6O60684 536 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 C9orf16Q9BUW7 83 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 CATSPERBQ9H7T0 1116 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MAN1B1Q9UKM7 699 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 RTTNQ86VV8 2226 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 JAK2O60674 1132 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 PRKAR1AP10644 381 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MAGEA2P43356 314 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ETAA1Q9NY74 926 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 AHSPQ9NZD4 102 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 COQ6Q9Y2Z9 468 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 CD58P19256 250 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 OGNP20774 298 aaKnown RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 FEN1P39748 380 aaKnown RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 SNRPFP62306 86 aaKnown RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 NANOGNBQ7Z5D8 188 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 CENPLQ8N0S6 344 aaPredicted RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 CD2BP2O95400 341 aaKnown RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 IL12AP29459 219 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ZYXQ15942 572 aaKnown RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 TMEM270Q6UE05 265 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 EPHX4Q8IUS5 362 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 TRPC4APQ8TEL6 797 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 VPS51Q9UID3 782 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 CORO2BQ9UQ03 480 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 VBP1P61758 197 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MAPKAPK5Q8IW41 473 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 SAMD3Q8N6K7 520 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 LRRC17Q8N6Y2 441 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 EHD3Q9NZN3 535 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 STK36Q9NRP7 1315 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 SOAT1P35610 550 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 DGKKQ5KSL6 1271 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 SPICE1Q8N0Z3 855 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MINDY2Q8NBR6 621 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 KATNAL1Q9BW62 490 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ASAP1Q9ULH1 1129 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MYO7AQ13402 2215 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF318Q5VUA4 2279 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 AIM2O14862 343 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 CCNG2Q16589 344 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 BNC2Q6ZN30 1099 aaPredicted RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF473Q8WTR7 871 aaKnown RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 PAGR1Q9BTK6 254 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 BCL2L14Q9BZR8 327 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 TASP1Q9H6P5 420 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF624Q9P2J8 865 aaPredicted RBP9.16□□□□□ -0.94
SYNE3-205ENST00000557275 AKT1P31749 480 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 HSF2Q03933 536 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 FAM220AQ7Z4H9 259 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 GOLPH3Q9H4A6 298 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 KPNA5O15131 536 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 PLCG1P19174 1290 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 NAPEPLDQ6IQ20 393 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 RNF135Q8IUD6 432 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 RDM1Q8NG50 284 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 OR6B3Q8NGW1 331 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 POLG2Q9UHN1 485 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 MYRFQ9Y2G1 1151 aa9.16□□□□□ -0.94
SYNE3-205ENST00000557275 BCLAF3A2AJT9 711 aaKnown RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 SSNA1O43805 119 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 C10orf53Q8N6V4 93 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 SNX31Q8N9S9 440 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 UGT2B28Q9BY64 529 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 STOX2Q9P2F5 926 aaPredicted RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 THRAP3Q9Y2W1 955 aaKnown RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 EFNA5P52803 228 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 FOXD4Q12950 439 aaPredicted RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 SF3B3Q15393 1217 aaKnown RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 CLYBLQ8N0X4 340 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 THUMPD3Q9BV44 507 aaKnown RBP9.15□□□□□ -0.94
SYNE3-205ENST00000557275 RSAD1Q9HA92 442 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 SNX24Q9Y343 169 aa9.15□□□□□ -0.94
SYNE3-205ENST00000557275 CDH6P55285 790 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms