RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 ITGAVP06756 1048 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 RAP1GAPP47736 663 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 SLC25A11Q02978 314 aaKnown RBP23.81■■□□□ 1.4
RCCD1-208ENST00000557266 ADCY1Q08828 1119 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 MORF4L2Q15014 288 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 RNASEH2BQ5TBB1 312 aaKnown RBP23.81■■□□□ 1.4
RCCD1-208ENST00000557266 PLPPR4Q7Z2D5 763 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 RIBC1Q8N443 379 aaPredicted RBP23.81■■□□□ 1.4
RCCD1-208ENST00000557266 ARFGAP1Q8N6T3 406 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 SGSM3Q96HU1 749 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 NLRP4Q96MN2 994 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 FZD8Q9H461 694 aa23.81■■□□□ 1.4
RCCD1-208ENST00000557266 EXOC1LA0A1B0GW35 172 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 NOP56O00567 594 aaKnown RBP23.8■■□□□ 1.4
RCCD1-208ENST00000557266 LACTBP83111 547 aaPredicted RBP23.8■■□□□ 1.4
RCCD1-208ENST00000557266 POLNQ7Z5Q5 900 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 JOSD2Q8TAC2 188 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 ZBTB10Q96DT7 871 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 ANKRD36BP1Q96IX9 119 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 STRIP2Q9ULQ0 834 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 RASA4BC9J798 803 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 RASA4O43374 803 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 PSMA2P25787 234 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 PSMC4P43686 418 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 HP1BP3Q5SSJ5 553 aaPredicted RBP23.8■■□□□ 1.4
RCCD1-208ENST00000557266 ARHGEF18Q6ZSZ5 1173 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 TMEM192Q8IY95 271 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 TMEM130Q8N3G9 435 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 SLC35B2Q8TB61 432 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 L3MBTL3Q96JM7 780 aaPredicted RBP23.8■■□□□ 1.4
RCCD1-208ENST00000557266 TTC25Q96NG3 672 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 TGS1Q96RS0 853 aaKnown RBP23.8■■□□□ 1.4
RCCD1-208ENST00000557266 PCDH9Q9HC56 1237 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 SIX4Q9UIU6 781 aa23.8■■□□□ 1.4
RCCD1-208ENST00000557266 INO80B-WBP1J3KQ70 363 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 CD19P15391 556 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 IL1R2P27930 398 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 STX2P32856 288 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 YWHAEP62258 255 aaKnown RBP23.79■■□□□ 1.4
RCCD1-208ENST00000557266 IRX3P78415 501 aaPredicted RBP23.79■■□□□ 1.4
RCCD1-208ENST00000557266 SMTNL2Q2TAL5 461 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 KIAA0319LQ8IZA0 1049 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 INO80BQ9C086 356 aaPredicted RBP23.79■■□□□ 1.4
RCCD1-208ENST00000557266 LHX5Q9H2C1 402 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 ZWILCHQ9H900 591 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 NKIRAS1Q9NYS0 192 aa23.79■■□□□ 1.4
RCCD1-208ENST00000557266 SIGLEC16A6NMB1 481 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 SGK1O00141 431 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 LRCH4O75427 683 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 CXCL8P10145 99 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 KRT3P12035 628 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 PLCB3Q01970 1234 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 PDE4CQ08493 712 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 ZKSCAN8Q15776 578 aaPredicted RBP23.78■■□□□ 1.4
RCCD1-208ENST00000557266 FAM133BQ5BKY9 247 aaKnown RBP23.78■■□□□ 1.4
RCCD1-208ENST00000557266 SWT1Q5T5J6 900 aaKnown RBP23.78■■□□□ 1.4
RCCD1-208ENST00000557266 PARP9Q8IXQ6 854 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 EXOC8Q8IYI6 725 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 MAGEB18Q96M61 343 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 CDT1Q9H211 546 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 MINDY3Q9H8M7 445 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 SAE1Q9UBE0 346 aaPredicted RBP23.78■■□□□ 1.4
RCCD1-208ENST00000557266 SHOC2Q9UQ13 582 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 IRF6O14896 467 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 IFNB1P01574 187 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 SPATA21Q7Z572 469 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 TRABD2AQ86V40 505 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 TDRPQ86YL5 185 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 PRCCQ92733 491 aaPredicted RBP23.78■■□□□ 1.4
RCCD1-208ENST00000557266 SDCBP2Q9H190 292 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 ASCC2Q9H1I8 757 aaPredicted RBP23.78■■□□□ 1.4
RCCD1-208ENST00000557266 CSADQ9Y600 493 aa23.78■■□□□ 1.4
RCCD1-208ENST00000557266 SUN1O94901 812 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 KRT19P08727 400 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 POLR2BP30876 1174 aaKnown RBP23.77■■□□□ 1.4
RCCD1-208ENST00000557266 CLCN3P51790 818 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 GTF2A1P52655 376 aaPredicted RBP23.77■■□□□ 1.4
RCCD1-208ENST00000557266 RAD23BP54727 409 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 CDH8P55286 799 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 DYNLT1P63172 113 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 MBTD1Q05BQ5 628 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 ORC1Q13415 861 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 KCNT1Q5JUK3 1230 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 CGB2Q6NT52 195 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 PPP1R21Q6ZMI0 780 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 SPATA33Q96N06 139 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 CPXM1Q96SM3 734 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 BCO2Q9BYV7 579 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 GGT7Q9UJ14 662 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 AGAP1Q9UPQ3 857 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 FAM47DPA6NHR8 397 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 ALOX15BO15296 676 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 NFICP08651 508 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 PSMC1P62191 440 aaKnown RBP23.77■■□□□ 1.4
RCCD1-208ENST00000557266 TMEM132AQ24JP5 1023 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 FBXO16Q8IX29 292 aaPredicted RBP23.77■■□□□ 1.4
RCCD1-208ENST00000557266 ZBED8Q8IZ13 594 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 COPS5Q92905 334 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 CD248Q9HCU0 757 aa23.77■■□□□ 1.4
RCCD1-208ENST00000557266 TXNRD2Q9NNW7 524 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms