RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ZGPATQ8N5A5 531 aaKnown RBP5.45□□□□□ -1.54
ATXN3-246ENST00000557030 MYRIPQ8NFW9 859 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.45□□□□□ -1.54
ATXN3-246ENST00000557030 PROKR1Q8TCW9 393 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 TFAP2CQ92754 450 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 AKIP1Q9NQ31 210 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 MIS18AQ9NYP9 233 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 TRPM5Q9NZQ8 1165 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 RUVBL1Q9Y265 456 aaKnown RBP5.45□□□□□ -1.54
ATXN3-246ENST00000557030 NFAT5O94916 1531 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 FAM171A2A8MVW0 826 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 RNASET2O00584 256 aaKnown RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 HTATSF1O43719 755 aaKnown RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 LPXNO60711 386 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 ALDH1L1O75891 902 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 NCR1O76036 304 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 GNAI2P04899 355 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 SNRPA1P09661 255 aaKnown RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 WASP42768 502 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 ALDH1A3P47895 512 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 SLC16A1P53985 500 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 RNASE9P60153 205 aaKnown RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 CHAF1AQ13111 956 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 UTP14CQ5TAP6 766 aaKnown RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 AGAP9Q5VTM2 703 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 AFMIDQ63HM1 303 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 OTUD7BQ6GQQ9 843 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 LAIR1Q6GTX8 287 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 G2E3Q7L622 706 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 PLXDC1Q8IUK5 500 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 VRK3Q8IV63 474 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 RHOT1Q8IXI2 618 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 RAVER1Q8IY67 606 aaKnown RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 SYNE4Q8N205 404 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 ZFP28Q8NHY6 868 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 CASKIN2Q8WXE0 1202 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 PIBF1Q8WXW3 757 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 FAM193BQ96PV7 902 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 ADAM2Q99965 735 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 C7orf25Q9BPX7 421 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 CCDC94Q9BW85 323 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 LRRCC1Q9C099 1032 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 STAP2Q9UGK3 403 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 SAP30BPQ9UHR5 308 aaKnown RBP5.44□□□□□ -1.54
ATXN3-246ENST00000557030 PCDHA13Q9Y5I0 950 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 ACTL7AQ9Y615 435 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 LRP6O75581 1613 aa5.44□□□□□ -1.54
ATXN3-246ENST00000557030 ADGRL3Q9HAR2 1447 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 TMEM191CA6NGB0 347 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 MX1P20591 662 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 PCSK1P29120 753 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 ATP8B2P98198 1209 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 PKP1Q13835 747 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 UAP1L1Q3KQV9 507 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 TIGD2Q4W5G0 525 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 DNTTIP2Q5QJE6 756 aaKnown RBP5.43□□□□□ -1.54
ATXN3-246ENST00000557030 ATXN7L2Q5T6C5 722 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-246ENST00000557030 MIGA2Q7L4E1 593 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 ZBTB46Q86UZ6 589 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 C16orf71Q8IYS4 520 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-246ENST00000557030 IL17REQ8NFR9 667 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 JDP2Q8WYK2 163 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 IP6K1Q92551 441 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 MEIS3Q99687 375 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 TTPALQ9BTX7 342 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 MRI1Q9BV20 369 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 STK31Q9BXU1 1019 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 DIAPH3Q9NSV4 1193 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 TMEM140Q9NV12 185 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 SYBUQ9NX95 663 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 MOCS1Q9NZB8 636 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 SLC23A1Q9UHI7 598 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-246ENST00000557030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATXN3-246ENST00000557030 SALL3Q9BXA9 1300 aa5.43□□□□□ -1.54
ATXN3-246ENST00000557030 RAMP2O60895 175 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 GPR32O75388 356 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 PARNO95453 639 aaKnown RBP5.42□□□□□ -1.54
ATXN3-246ENST00000557030 AMY1AP04745 511 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 ELANEP08246 267 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 IL2RBP14784 551 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 CHMLP26374 656 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 CHN2P52757 468 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 UBE2HP62256 183 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 IL10RAQ13651 578 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 TTF1Q15361 905 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-246ENST00000557030 SEM1Q6ZVN7 128 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 NOL8Q76FK4 1167 aaKnown RBP5.42□□□□□ -1.54
ATXN3-246ENST00000557030 RHOT2Q8IXI1 618 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 OTUD7AQ8TE49 926 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-246ENST00000557030 FUBP1Q96AE4 644 aaKnown RBP5.42□□□□□ -1.54
ATXN3-246ENST00000557030 ZSCAN31Q96LW9 406 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-246ENST00000557030 MYOCQ99972 504 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 GTPBP4Q9BZE4 634 aaKnown RBP5.42□□□□□ -1.54
ATXN3-246ENST00000557030 MANSC1Q9H8J5 431 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 BABAM1Q9NWV8 329 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 USP25Q9UHP3 1055 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 SERPINB13Q9UIV8 391 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 TSPYL4Q9UJ04 414 aa5.42□□□□□ -1.54
ATXN3-246ENST00000557030 PXDNLA1KZ92 1463 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms