RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 ATP2A3Q93084 1043 aa13.34□□□□□ -0.27
ABCD4-226ENST00000556971 CNDP2Q96KP4 475 aaKnown RBP13.34□□□□□ -0.27
ABCD4-226ENST00000556971 GCNAQ96QF7 691 aa13.34□□□□□ -0.27
ABCD4-226ENST00000556971 SEMA3CQ99985 751 aa13.34□□□□□ -0.27
ABCD4-226ENST00000556971 GOLGA2P5Q9HBQ8 144 aa13.34□□□□□ -0.27
ABCD4-226ENST00000556971 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
ABCD4-226ENST00000556971 ANKHD1Q8IWZ3 2542 aaKnown RBP13.34□□□□□ -0.27
ABCD4-226ENST00000556971 hCG_1642624A0A1W2PR95 340 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.28
ABCD4-226ENST00000556971 INO80B-WBP1J3KQ70 363 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 KCNK3O14649 394 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 B4GALT5O43286 388 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 PCDHGA12O60330 932 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 SOAT2O75908 522 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 RNF224P0DH78 156 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 SFTPCP11686 197 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 IFNAR2P48551 515 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 FOSBP53539 338 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 NCBP1Q09161 790 aaKnown RBP13.33□□□□□ -0.28
ABCD4-226ENST00000556971 MESP2Q0VG99 397 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 KIF19Q2TAC6 998 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 HSF5Q4G112 596 aaPredicted RBP13.33□□□□□ -0.28
ABCD4-226ENST00000556971 XKR3Q5GH77 459 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 GLRA4Q5JXX5 417 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 PI4K2BQ8TCG2 481 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 PSMG2Q969U7 264 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 MAFFQ9ULX9 164 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 SNX11Q9Y5W9 270 aa13.33□□□□□ -0.28
ABCD4-226ENST00000556971 LRRK1Q38SD2 2015 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 ZNF217O75362 1048 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 STBD1O95210 358 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 ALDH1A3P47895 512 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 ERVPABLB-1P60509 514 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 DUSP4Q13115 394 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 AMHR2Q16671 573 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 INF2Q27J81 1249 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 EML3Q32P44 896 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 ARL13BQ3SXY8 428 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 ZNF280DQ6N043 979 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 SLC27A1Q6PCB7 646 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 CYB5R4Q7L1T6 521 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 MAB21L3Q8N8X9 362 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 DCBLD1Q8N8Z6 715 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 OSCP1Q8WVF1 389 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 MOCOSQ96EN8 888 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 SLC25A18Q9H1K4 315 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 TDP1Q9NUW8 608 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 DENND4CQ5VZ89 1909 aa13.32□□□□□ -0.28
ABCD4-226ENST00000556971 RP1L1Q8IWN7 2480 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 E2F8A0AVK6 867 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 DXOO77932 396 aaKnown RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 LDOC1O95751 146 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 OR4Q2P0C623 313 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 CDC25CP30307 473 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 KIR2DL1P43626 348 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 CSNK1EP49674 416 aaKnown RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 MRPL58Q14197 206 aaKnown RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 UPP1Q16831 310 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 SGMS1Q86VZ5 419 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 EFCAB13Q8IY85 973 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 TTC9BQ8N6N2 239 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 FAM20AQ96MK3 541 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 JPH2Q9BR39 696 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 KRT23Q9C075 422 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 IL21Q9HBE4 155 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 ASCL3Q9NQ33 180 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 ZFC3H1O60293 1989 aaKnown RBP13.31□□□□□ -0.28
ABCD4-226ENST00000556971 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
ABCD4-226ENST00000556971 SDK2Q58EX2 2172 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 H0Y8X5 98 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 SYN3O14994 580 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 NCAM1P13591 858 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 CASRP41180 1078 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
ABCD4-226ENST00000556971 NR1H3Q13133 447 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 C1QL3Q5VWW1 255 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 HEATR3Q7Z4Q2 680 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 GATAD2AQ86YP4 633 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 LSMEM2Q8N112 164 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 MMP21Q8N119 569 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 ZNF564Q8TBZ8 553 aaPredicted RBP13.3□□□□□ -0.28
ABCD4-226ENST00000556971 SSC4DQ8WTU2 575 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 SLC6A17Q9H1V8 727 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 SLC27A5Q9Y2P5 690 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 ASB3Q9Y575 518 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 SLCO1B1Q9Y6L6 691 aa13.3□□□□□ -0.28
ABCD4-226ENST00000556971 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
ABCD4-226ENST00000556971 NMT1P30419 496 aaKnown RBP13.29□□□□□ -0.28
ABCD4-226ENST00000556971 OXCT1P55809 520 aa13.29□□□□□ -0.28
ABCD4-226ENST00000556971 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
ABCD4-226ENST00000556971 MBTD1Q05BQ5 628 aa13.29□□□□□ -0.28
ABCD4-226ENST00000556971 PCBP1Q15365 356 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms