RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 IGFBP6P24592 240 aaPredicted RBP25.21■■□□□ 1.63
SIX4-203ENST00000556952 OR1G1P47890 313 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 LHX1P48742 406 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 GALCP54803 685 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 NOMO3P69849 1222 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 ORC1Q13415 861 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 ACAD10Q6JQN1 1059 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 CTNNBL1Q8WYA6 563 aaPredicted RBP25.21■■□□□ 1.63
SIX4-203ENST00000556952 TNIP3Q96KP6 325 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 SUSD3Q96L08 255 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 HEXIM2Q96MH2 286 aaKnown RBP25.21■■□□□ 1.63
SIX4-203ENST00000556952 ZNF518BQ9C0D4 1074 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 NRDE2Q9H7Z3 1164 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 TRIM10Q9UDY6 481 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 GUCA1BQ9UMX6 200 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 MYO9BQ13459 2157 aa25.2■■□□□ 1.63
SIX4-203ENST00000556952 FTLP02792 175 aaPredicted RBP25.2■■□□□ 1.62
SIX4-203ENST00000556952 CYP11A1P05108 521 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 CDH5P33151 784 aaPredicted RBP25.2■■□□□ 1.62
SIX4-203ENST00000556952 CNGA2Q16280 664 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 WSCD1Q658N2 575 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 Q7L0L9 218 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 CRYBG2Q8N1P7 616 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 SP7Q8TDD2 431 aaPredicted RBP25.2■■□□□ 1.62
SIX4-203ENST00000556952 ZNF689Q96CS4 500 aaPredicted RBP25.2■■□□□ 1.62
SIX4-203ENST00000556952 CYFIP2Q96F07 1278 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 LHX5Q9H2C1 402 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 DNAJB4Q9UDY4 337 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.2■■□□□ 1.62
SIX4-203ENST00000556952 NME7Q9Y5B8 376 aa25.2■■□□□ 1.62
SIX4-203ENST00000556952 A0A0A6YYK5 440 aaPredicted RBP25.19■■□□□ 1.62
SIX4-203ENST00000556952 ABL1P00519 1130 aa25.19■■□□□ 1.62
SIX4-203ENST00000556952 NSFP46459 744 aaKnown RBP25.19■■□□□ 1.62
SIX4-203ENST00000556952 ETF1P62495 437 aaKnown RBP25.19■■□□□ 1.62
SIX4-203ENST00000556952 PAN2Q504Q3 1202 aaKnown RBP25.19■■□□□ 1.62
SIX4-203ENST00000556952 RNF10Q8N5U6 811 aaKnown RBP25.19■■□□□ 1.62
SIX4-203ENST00000556952 TMEM35BQ8NCS4 154 aa25.19■■□□□ 1.62
SIX4-203ENST00000556952 SECISBP2LQ93073 1101 aaKnown RBP25.19■■□□□ 1.62
SIX4-203ENST00000556952 TRIM11Q96F44 468 aa25.19■■□□□ 1.62
SIX4-203ENST00000556952 NCANO14594 1321 aa25.19■■□□□ 1.62
SIX4-203ENST00000556952 TRANK1O15050 2925 aa25.19■■□□□ 1.62
SIX4-203ENST00000556952 O00370 1275 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 CFHP08603 1231 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 TNNT1P13805 278 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 BRCC3P46736 316 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 NAA35Q5VZE5 725 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 PPP2R2DQ66LE6 453 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 ACOT1Q86TX2 421 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 OSTM1Q86WC4 334 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 METTL23Q86XA0 190 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 PASD1Q8IV76 773 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 HASPINQ8TF76 798 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 SLC28A3Q9HAS3 691 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 LINC01553A4QN01 128 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 TRAPPC3O43617 180 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 ITGB1P05556 798 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 TYMPP19971 482 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 TAP1Q03518 808 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 GPR153Q6NV75 609 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 LCLAT1Q6UWP7 414 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 FAM161BQ96MY7 647 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 COLEC11Q9BWP8 271 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 PCDHB8Q9UN66 801 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 DUSP10Q9Y6W6 482 aa25.18■■□□□ 1.62
SIX4-203ENST00000556952 NRP1O14786 923 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 ALDH2P05091 517 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 LMO2P25791 158 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 ZNF697Q5TEC3 545 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 ARHGAP17Q68EM7 881 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 DNAAF5Q86Y56 855 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 PHF13Q86YI8 300 aaPredicted RBP25.17■■□□□ 1.62
SIX4-203ENST00000556952 VCPIP1Q96JH7 1222 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 THAP2Q9H0W7 228 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 DPEP3Q9H4B8 488 aa25.17■■□□□ 1.62
SIX4-203ENST00000556952 DDX43Q9NXZ2 648 aaKnown RBP25.17■■□□□ 1.62
SIX4-203ENST00000556952 PRG3Q9Y2Y8 225 aaPredicted RBP25.17■■□□□ 1.62
SIX4-203ENST00000556952 COL4A4P53420 1690 aaPredicted RBP25.17■■□□□ 1.62
SIX4-203ENST00000556952 MACROD2A1Z1Q3 448 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 MICAL2O94851 1124 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 PDGFRBP09619 1106 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 MYBL1P10243 752 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 ABCB4P21439 1286 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 GNG11P61952 73 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 GPC5P78333 572 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 IFI16Q16666 785 aaKnown RBP25.16■■□□□ 1.62
SIX4-203ENST00000556952 B3GALNT2Q8NCR0 500 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 CPA5Q8WXQ8 436 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 RFFLQ8WZ73 363 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 ZNF576Q9H609 170 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 GTF3C4Q9UKN8 822 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 ADAM28Q9UKQ2 775 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 FAN1Q9Y2M0 1017 aa25.16■■□□□ 1.62
SIX4-203ENST00000556952 TMEM265A0A087WTH1 108 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 F8W810 466 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 I3L4J1 428 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 TADA2AO75478 443 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 PCSK1P29120 753 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 SSTR3P32745 418 aaPredicted RBP25.15■■□□□ 1.62
SIX4-203ENST00000556952 SLC11A1P49279 550 aa25.15■■□□□ 1.62
SIX4-203ENST00000556952 DNTTIP2Q5QJE6 756 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms