RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 NYXQ9GZU5 481 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 KIAA1683Q9H0B3 1180 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 XKR8Q9H6D3 395 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 SUGCTQ9HAC7 445 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 VTA1Q9NP79 307 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 WASH6PQ9NQA3 447 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 RAD18Q9NS91 495 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 INTS10Q9NVR2 710 aaKnown RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 PAQR5Q9NXK6 330 aaPredicted RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 PTBP2Q9UKA9 531 aaKnown RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 APOBEC2Q9Y235 224 aaKnown RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 IPPQ9Y573 584 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 MAGI1Q96QZ7 1491 aaPredicted RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 PDS5AQ29RF7 1337 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 ZNF608Q9ULD9 1512 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 A0A1B0GWJ7 208 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 CTAGE9A4FU28 777 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 SLC9B1P1A6NJY1 282 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 BECN2A8MW95 431 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 MIF4GDA9UHW6 222 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 ANKRD65E5RJM6 399 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 F8W735 103 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 H3BQF6 201 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 J3KRW8 73 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 GFRA2O00451 464 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 RAD51BO15315 384 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 EIF3HO15372 352 aaKnown RBP eCLIP6.52□□□□□ -1.37
TDP1-215ENST00000556498 STX10O60499 249 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 CLN5O75503 358 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 KLHL2O95198 593 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 ATP6V1G2O95670 118 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 IL33O95760 270 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 ASS1P00966 412 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 PRLP01236 227 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 MT-ND3P03897 115 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 ASLP04424 464 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 FYNP06241 537 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 ATF4P18848 351 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 CDH3P22223 829 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 HOXA6P31267 233 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 PHBP35232 272 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 TM4SF4P48230 202 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 CDK8P49336 464 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 IRAK1P51617 712 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 HADHBP55084 474 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 RAB14P61106 215 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 NOP14P78316 857 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 PRKCEQ02156 737 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 LGALS3BPQ08380 585 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 SLFN5Q08AF3 891 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 PICALMQ13492 652 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 MXD4Q14582 209 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 INPP5AQ14642 412 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 TTF1Q15361 905 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 ALX1Q15699 326 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 IFI16Q16666 785 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 RGS21Q2M5E4 152 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 CEP55Q53EZ4 464 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 LACTB2Q53H82 288 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 SPDYAQ5MJ70 313 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 PDPK2PQ6A1A2 396 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 ZYG11AQ6WRX3 759 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 ALYREFQ86V81 257 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 PLA2G4DQ86XP0 818 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 CLVS1Q8IUQ0 354 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 C7orf31Q8N865 590 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 SMG8Q8ND04 991 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 OR6S1Q8NH40 331 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 IFI44Q8TCB0 444 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 UTP15Q8TED0 518 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 GRK7Q8WTQ7 553 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 NKD1Q969G9 470 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 AZIN2Q96A70 460 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 RRP36Q96EU6 259 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 LTV1Q96GA3 475 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 ZNF274Q96GC6 653 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 EGLN2Q96KS0 407 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 CFAP57Q96MR6 1250 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 OLFM3Q96PB7 478 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 USP28Q96RU2 1077 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 TCF25Q9BQ70 676 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 PI4K2AQ9BTU6 479 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 FSD1Q9BTV5 496 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 MXD3Q9BW11 206 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 RHOBTB2Q9BYZ6 727 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 IMPG2Q9BZV3 1241 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 PITHD1Q9GZP4 211 aaPredicted RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 AZI2Q9H6S1 392 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 FAM204AQ9H8W3 233 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 NOD2Q9HC29 1040 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 HPS4Q9NQG7 708 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 DIABLOQ9NR28 239 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 SAMSN1Q9NSI8 373 aaKnown RBP6.52□□□□□ -1.37
TDP1-215ENST00000556498 IL37Q9NZH6 218 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 TBC1D14Q9P2M4 693 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 KCNN3Q9UGI6 736 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 ATP6V1HQ9UI12 483 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 SCOCQ9UIL1 159 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 TLK1Q9UKI8 766 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms