RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ME3Q16798 604 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 TRIM61Q5EBN2 209 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 KRT79Q5XKE5 535 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 RINT1Q6NUQ1 792 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 ARMCX6Q7L4S7 300 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 THEM5Q8N1Q8 247 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 TMEM161BQ8NDZ6 487 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 STKLD1Q8NE28 680 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 CCDC26Q8TAB7 109 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 ATP2A3Q93084 1043 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 ZCWPW1Q9H0M4 648 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 ECT2Q9H8V3 914 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 DSEQ9UL01 958 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 TBX20Q9UMR3 447 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 STK24Q9Y6E0 443 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 CACNA1EQ15878 2313 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 ZNF638Q14966 1978 aaKnown RBP15.07■□□□□ 0
ACTN1-219ENST00000556432 THADAQ6YHU6 1953 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 ASCC3Q8N3C0 2202 aaKnown RBP15.07■□□□□ 0
ACTN1-219ENST00000556432 DMXL2Q8TDJ6 3036 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 MAP3K13O43283 966 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 SEC24BO95487 1268 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 HAPLN1P10915 354 aaPredicted RBP15.06■□□□□ 0
ACTN1-219ENST00000556432 PLS3P13797 630 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 RDXP35241 583 aaKnown RBP15.06■□□□□ 0
ACTN1-219ENST00000556432 LIG4P49917 911 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 NR1H3Q13133 447 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 ENOX2Q16206 610 aaKnown RBP15.06■□□□□ 0
ACTN1-219ENST00000556432 KYAT1Q16773 422 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 C2orf27AQ580R0 203 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 JADE1Q6IE81 842 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 C1orf186Q6ZWK4 172 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 TMEM150AQ86TG1 271 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 RIN3Q8TB24 985 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 SPPL2BQ8TCT7 592 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 C2orf15Q8WU43 125 aaKnown RBP15.06■□□□□ 0
ACTN1-219ENST00000556432 SPIRE2Q8WWL2 714 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 PYM1Q9BRP8 204 aaKnown RBP15.06■□□□□ 0
ACTN1-219ENST00000556432 TIPINQ9BVW5 301 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 HAPLN2Q9GZV7 340 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 KCNG1Q9UIX4 513 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 MSRB2Q9Y3D2 182 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 WNT6Q9Y6F9 365 aa15.06■□□□□ 0
ACTN1-219ENST00000556432 NBEAQ8NFP9 2946 aa15.05■□□□□ 0
ACTN1-219ENST00000556432 PP2D1A8MPX8 630 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 CYB561D2O14569 222 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 HNRNPDLO14979 420 aaKnown RBP15.05■□□□□ -0
ACTN1-219ENST00000556432 CKMP06732 381 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 ATXN3P54252 364 aaPredicted RBP15.05■□□□□ -0
ACTN1-219ENST00000556432 NBR1Q14596 966 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 TMEM132DQ14C87 1099 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 SPATA1Q5VX52 437 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 C9orf57Q5W0N0 161 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 LPCAT2Q7L5N7 544 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 MON1AQ86VX9 555 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 CCDC33Q8N5R6 958 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 OSCP1Q8WVF1 389 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 EZH1Q92800 747 aaPredicted RBP15.05■□□□□ -0
ACTN1-219ENST00000556432 SPACA7Q96KW9 195 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 CNOT6LQ96LI5 555 aaKnown RBP15.05■□□□□ -0
ACTN1-219ENST00000556432 NOL7Q9UMY1 257 aaKnown RBP15.05■□□□□ -0
ACTN1-219ENST00000556432 PCDHB5Q9Y5E4 795 aa15.05■□□□□ -0
ACTN1-219ENST00000556432 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
ACTN1-219ENST00000556432 PRPF40AO75400 957 aaKnown RBP15.04■□□□□ -0
ACTN1-219ENST00000556432 ALDH1A2O94788 518 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 F11P03951 625 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 CYP11A1P05108 521 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 CFIP05156 583 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 NFICP08651 508 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 CSH1P0DML2 217 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 CSH2P0DML3 217 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 HMGA1P17096 107 aaKnown RBP15.04■□□□□ -0
ACTN1-219ENST00000556432 ENGP17813 658 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 PAX3P23760 479 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 GPR15P49685 360 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 FAM160A1Q05DH4 1040 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 SMARCB1Q12824 385 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 PDIA5Q14554 519 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 ZNF268Q14587 947 aaPredicted RBP15.04■□□□□ -0
ACTN1-219ENST00000556432 SDHAF4Q5VUM1 108 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 DCP1BQ8IZD4 617 aaKnown RBP15.04■□□□□ -0
ACTN1-219ENST00000556432 HDDC3Q8N4P3 179 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 MDGA1Q8NFP4 955 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 USP33Q8TEY7 942 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 C8orf76Q96K31 380 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 TSPAN18Q96SJ8 248 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 NTPCRQ9BSD7 190 aaKnown RBP15.04■□□□□ -0
ACTN1-219ENST00000556432 PI4K2AQ9BTU6 479 aa15.04■□□□□ -0
ACTN1-219ENST00000556432 BCCIPQ9P287 314 aaKnown RBP eCLIP15.04■□□□□ -0
ACTN1-219ENST00000556432 EVLQ9UI08 416 aaPredicted RBP15.04■□□□□ -0
ACTN1-219ENST00000556432 TSC2P49815 1807 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 ATXN2Q99700 1313 aaKnown RBP15.03■□□□□ -0
ACTN1-219ENST00000556432 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 TRAV19A0A0A6YYK7 116 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 H0YCG3 227 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 TAF4O00268 1085 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 OGTO15294 1046 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 USP17L7P0C7H9 530 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 GUCY2CP25092 1073 aa15.03■□□□□ -0
ACTN1-219ENST00000556432 CDC25AP30304 524 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms